Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq10 96.9 3e-15 seq44 87.8 2e-12 >seq10 Length=2329298 Score = 96.9 bits (106), Expect = 3e-15 Identities = 164/233 (70%), Gaps = 6/233 (3%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| || || ||||| | || || || || || ||| ||| ||||| || Sbjct 1252967 ATGCAAATTTTCGTGAAAACTCTTACTGGCAAGACGATCACCTTGGAAGTTGAACCCTCT 1253026 Query 28614 GAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | || | || || |||| || ||||||||||| | || |||||| Sbjct 1253027 GATACAATTGAGAATGTGAAAGCTAAAATTCAA-GACAAAGAGGGCATTCCACCAGATCA 1253085 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGAT--TCTAAAACTATGGCCGATTAT 28730 |||| | ||||||||||| || ||||| ||||| ||| || | ||| | ||||||| Sbjct 1253086 ACAGCGTCTTATCTTTGCTGGAAAACAGTTGGAGGATGGTCGTACACTCT--CCGATTAC 1253143 Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 || || |||||||| ||||| || || | || | ||||| ||||||| || Sbjct 1253144 AATATCCAAAAAGAGTCTACCCTTCATCTTGTGCTGAGATTGAGAGGAGGTAT 1253196 Score = 95.1 bits (104), Expect = 1e-14 Identities = 162/233 (70%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 |||||| || || || ||||| || || |||||||| || || ||| ||||| || Sbjct 1254106 AATGCAGATCTTCGTGAAAACTTTGACTGGTAAAACGATAACATTGGAAGTCGAACCATC 1254165 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | || | ||| ||||| || || || ||| | ||| |||||| Sbjct 1254166 CGATACCATCGAAAATGTTAAGGCTAAAATTCAGGATAAGGAAGGAATTCCCCCAGATCA 1254225 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGAT--TCTAAAACTATGGCCGATTAT 28730 || | ||||||||||| || || |||||||||||| | | ||| | | ||||| Sbjct 1254226 GCAACGTCTTATCTTTGCTGGAAAGCAATTGGAAGATGGACGCACACTTT--CTGATTAC 1254283 Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 || |||||||| ||||||||||| ||| |||| | || | || ||||| || Sbjct 1254284 AATATTCAAAAGGAATCTACTCTCCACTTGGTCCTCCGACTTCGTGGAGGTAT 1254336 Score = 89.7 bits (98), Expect = 4e-13 Identities = 160/232 (69%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 ||||| || ||||| || || || || || ||||| ||||| ||| |||||||| Sbjct 1254563 ATGCAGATTTTTGTTAAGACGTTGACTGGCAAAACGATTACTTTGGAAGTTGAACCTTCT 1254622 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || | ||| || || || || || || | ||| ||| || Sbjct 1254623 GACACTATTGAAAATGTGAAGGCTAAGATTCAGGATAAGGAAGGCATCCCCCCAGACCAG 1254682 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATT--CTAAAACTATGGCCGATTATA 28731 |||||| | || ||||| ||||| ||||||||||| | | ||| | |||| |||| Sbjct 1254683 CAGAGATTAATTTTTGCTGGCAAGCAATTGGAAGACGGACGCACACTTT--CCGACTATA 1254740 Query 28732 ACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 ||||||| || || || ||||| ||| ||||| | ||| | || ||||| || Sbjct 1254741 ACATTCAGAAGGAGTCCACTCTCCACTTGGTACTGAGACTTCGTGGAGGTAT 1254792 Score = 87.8 bits (96), Expect = 2e-12 Identities = 159/233 (68%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 28551 AAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCT 28610 |||||||| || ||||| || ||| |||| || ||||| || ||| ||| || ||| Sbjct 1252736 AAAATGCAGATCTTTGTGAAGACACTAACAGGCAAAACTATCACCTTGGAAGTTGAGCCT 1252795 Query 28611 TCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGAT 28670 || || || | | | | ||| || || || ||||||||| | || ||| Sbjct 1252796 TCTGATACCATTGAAAACGTTAAGGCTAAGATTCAGGATAAAGAGGGAATTCCTCCAGAC 1252855 Query 28671 CAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 28730 || || ||| | |||||||| |||||||| | |||||| | || || | |||||| Sbjct 1252856 CAGCAAAGATTGATCTTTGCTGGCAAACAGCTAGAAGATGGTCGCACGCTGTCTGATTAT 1252915 Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 ||||||||||| || || || || || |||| | | | || |||||||| Sbjct 1252916 AACATTCAAAAGGAGTCGACCCTACATTTGGTCCTTCGTCTTCGTGGAGGGAT 1252968 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| || || || || ||||| || ||||| || || || ||||| ||| Sbjct 1254791 ATGCAAATCTTCGTGAAGACTTTAACCGGCAAAACTATCACTTTGGAGGTTGAACCGTCA 1254850 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | | ||| || || |||||||| || | || ||||||| Sbjct 1254851 GACACAATTGAGAACGTTAAGGCCAAGATTCAGGACAAAGAAGGGATTCCTCCAGATCAA 1254910 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 || | ||||||||||| || || ||||||||||| | ||| || |||| |||||| Sbjct 1254911 CAACGTCTTATCTTTGCTGGTAAGCAATTGGAAGACGGTCGCACTTTGTCCGACTATAAC 1254970 Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTA 28763 || || || ||||| ||||| || ||||| Sbjct 1254971 ATCCAGAAGGAATCCACTCTCCATTTGGTA 1255000 >seq44 Length=1094211 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| || ||||| || ||||||| || ||||| || || ||||| || Sbjct 805342 ATGCAAATTTTCGTAAAGACCCTAACGGGCAAGACCATCACTCTTGAGGTCGAACCCTCT 805401 Query 28614 GAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | || |||| ||||| | || || ||||| || | ||| |||||| Sbjct 805402 GATACTATTGAAAATGTCAAAGCAAAGATTCAA-GATAAAGAAGGTATTCCCCCAGATCA 805460 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 ||| | || |||||||| || ||||||||||| ||| | || || |||| || || Sbjct 805461 ACAACGTCTGATCTTTGCTGGTAAACAATTGGAGGATGGTCGTACACTGTCCGACTACAA 805520 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGT 28762 || ||||| ||||| || || ||| |||| Sbjct 805521 TATCCAAAAGGAATCAACCCTCCACTTGGT 805550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425328611994405