Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq10 154 3e-32 seq44 122 2e-22 >seq10 Length=2329298 Score = 154 bits (170), Expect = 3e-32 Identities = 144/183 (79%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 193178 AATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCT 193237 ||| ||||||||||| | || | | ||| || | ||||| || |||||||| || | Sbjct 1253377 AATGTTATAGTCGGAGAGAGTACGACCATCCTCAAGCTGTTTACCAGCAAAAATCAAACG 1253318 Query 193238 CTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGT 193297 ||||||||| ||||| || |||||||||||||| ||||||| ||| | |||| ||| || Sbjct 1253317 CTGTTGATCTGGAGGAATACCTTCTTTATCTTGGATTTTGGCTTTCACATTTTCAATTGT 1253258 Query 193298 ATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTG 193357 ||| |||| ||||||||||| || || ||||| || || || ||||||||||| || || Sbjct 1253257 ATCAGAAGGCTCAACTTCTAATGTAATTGTTTTCCCAGTCAGTGTTTTTACAAAAATCTG 1253198 Query 193358 CAT 193360 ||| Sbjct 1253197 CAT 1253195 Score = 138 bits (152), Expect = 2e-27 Identities = 172/236 (73%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 193126 TTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTAT 193185 |||| | ||||||| | || ||| || |||||||| || | ||| || || |||| Sbjct 1255253 TTTAATTTCCACCTCGAAGTCTAAGGACAAGATGCAAGGTTGACTCCTTCTGGATGTTAT 1255194 Query 193186 AGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGAT 193245 | ||||| | || | ||| || | |||||| ||||||||||| || | || |||| Sbjct 1255193 AATCGGACAGAGTGCGGCCATCCTCGAGTTGTTTACCGGCAAAAATCAAACGTTGCTGAT 1255134 Query 193246 CAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAG 193305 | ||||| |||||||| ||||| || ||||| | || | |||| ||| ||||| |||| Sbjct 1255133 CTGGAGGAATTCCTTCCTTATCCTGGATTTTAGCCTTGACATTTTCAATGGTATCAGAAG 1255074 Query 193306 ACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 |||||||| | ||| || |||||||| || | || || ||||| || |||||| Sbjct 1255073 GTTCAACTTCCAAAGTGATCGTTTTACCCGTCAAGGTCTTCACAAAAATCTGCATT 1255018 Score = 129 bits (142), Expect = 1e-24 Identities = 158/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205 || || |||||||| | || | ||| || || || || ||||| || || | | | Sbjct 1254093 CGCAGAACCAGATGGAGAGTTGACTCCTTTTGGATGTTGTAATCGGACAAAGTGCGACCA 1254034 Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || ||||||||||| |||||||| || | || || ||||| || || || || || ||| Sbjct 1254033 TCCTCTAATTGTTTACCGGCAAAGATGAGTCGTTGCTGATCCGGTGGGATACCCTCCTTA 1253974 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 ||||| || || | ||| | ||| ||| |||||||| | ||| ||||| ||||| ||| Sbjct 1253973 TCTTGGATCTTAGCTTTAACATTCTCAATGGTATCGGATGGCTCGACTTCCAGAGTGATA 1253914 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 ||||| || || | || |||||||| || |||||| Sbjct 1253913 GTTTTGCCAGTCAATGTCTTTACAAAGATCTGCATT 1253878 Score = 120 bits (132), Expect = 5e-22 Identities = 168/236 (71%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| ||||| || | | || ||||||| || | || | ||| || ||| ||| Sbjct 1254798 ATTTGCATACCTCCACGAAGTCTCAGTACCAAGTGGAGAGTGGACTCCTTCTGAATGTTA 1254739 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 |||||||| | || | || || ||||| || || ||||||||||||||||| || Sbjct 1254738 TAGTCGGAAAGTGTGCGTCCGTCTTCCAATTGCTTGCCAGCAAAAATTAATCTCTGCTGG 1254679 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || || || || ||||| ||||| || || || | || | |||| |||||| || ||| Sbjct 1254678 TCTGGGGGGATGCCTTCCTTATCCTGAATCTTAGCCTTCACATTTTCAATAGTGTCAGAA 1254619 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 | |||||||| | ||| || ||||| || || | ||| || ||||| || ||||| Sbjct 1254618 GGTTCAACTTCCAAAGTAATCGTTTTGCCAGTCAACGTCTTAACAAAAATCTGCAT 1254563 Score = 100 bits (110), Expect = 5e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205 |||||||||| ||| | || | || || || ||||||||||| || || | | Sbjct 1255005 CGAAGTACCAAATGGAGAGTGGATTCCTTCTGGATGTTATAGTCGGACAAAGTGCGACCG 1254946 Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || ||||| || || ||||| || | | |||||||| ||||| || |||||||| Sbjct 1254945 TCTTCCAATTGCTTACCAGCAAAGATAAGACGTTGTTGATCTGGAGGAATCCCTTCTTTG 1254886 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 || || || |||| || | || ||| || || || | ||||| || | ||| ||| Sbjct 1254885 TCCTGAATCTTGGCCTTAACGTTCTCAATTGTGTCTGACGGTTCAACCTCCAAAGTGATA 1254826 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| || |||| || || || || |||||||| Sbjct 1254825 GTTTTGCCGGTTAAAGTCTTCACGAAGATTTGCAT 1254791 >seq44 Length=1094211 Score = 122 bits (134), Expect = 2e-22 Identities = 136/182 (75%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238 ||||| |||||||| | || | | ||| || |||||||| || ||||| || | | Sbjct 805523 ATATTGTAGTCGGACAGTGTACGACCATCCTCCAATTGTTTACCAGCAAAGATCAGACGT 805464 Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298 |||||||| || || || |||||||||||||| || || | ||| | |||| ||||||| Sbjct 805463 TGTTGATCTGGGGGAATACCTTCTTTATCTTGAATCTTTGCTTTGACATTTTCAATAGTA 805404 Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGC 193358 || || | || || || ||||| || || || || ||||| || ||||| || |||||| Sbjct 805403 TCAGAGGGTTCGACCTCAAGAGTGATGGTCTTGCCCGTTAGGGTCTTTACGAAAATTTGC 805344 Query 193359 AT 193360 || Sbjct 805343 AT 805342 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899489144732400