Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq10 145 2e-29 seq170 122 2e-22 seq44 118 2e-21 seq39 116 7e-21 >seq10 Length=2329298 Score = 145 bits (160), Expect = 2e-29 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||| || | |||||||| |||||||||| ||| | || || || ||||| || Sbjct 1253424 ATACCTCCGCGAAGACGTAGAACTAAATGTAGAGTGGATTCCTTCTGAATGTTATAGTCG 1253365 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || || |||| || | |||||||||||||| || || | ||||||||| || Sbjct 1253364 GAGAGAGTACGACCATCCTCAAGCTGTTTACCAGCAAAAATCAAACGCTGTTGATCTGGA 1253305 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||||||||| ||||| ||| ||||| || | ||| || | || Sbjct 1253304 GGAATACCTTCTTTATCTTGGATTTTGGCTTTCACATTTTCAATTGTATCAGAAGGCTCA 1253245 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||||| ||||| ||||| ||||| | |||||| | ||| |||||||| Sbjct 1253244 ACTTCTAATGTAATTGTTTTCCCAGTCAGTGTTTTTACAAAAATCTGCAT 1253195 Score = 140 bits (154), Expect = 6e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||| |||| || || | || || || | || | |||||| |||||| || ||| Sbjct 1254564 ATACCTCCTCGCAGGCGAAGCACCAAGTGAAGGGTCGACTCTTTCTGGATATTGTAGTCA 1254505 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 |||||||| || |||| |||||||||||||||||||| || || | || ||||| ||| Sbjct 1254504 GATAATGTGCGCCCATCCTCCAATTGTTTACCAGCAAAAATCAAACGTTGCTGATCTGGT 1254445 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||| ||||| || ||| |||||||| |||| || || | || Sbjct 1254444 GGAATGCCTTCTTTGTCTTGAATCTTAGCCTTTACATTTTCAATAGTGTCAGAGGGCTCG 1254385 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| | || ||||| || |||||||| || || | ||| || ||||| Sbjct 1254384 ACTTCCAAGGTGATGGTCTTCCCAGTTAAAGTCTTTACAAAAATTTGCAT 1254335 Score = 136 bits (150), Expect = 8e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || ||||| | ||||||| ||| || || | || | ||| || |||||||||||| Sbjct 1253652 ATTCCACCCCGGAGACGTAGTACCAAGTGGAGGGTGGACTCCTTCTGAATATTATAATCA 1253593 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 ||||| || || |||| ||||||||||| ||||||||||| | || || ||||| || Sbjct 1253592 GATAAGGTACGGCCATCCTCCAATTGTTTCCCAGCAAAGATGAGTCGTTGCTGATCTGGA 1253533 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || |||||||| |||||||| || || || ||||| |||| || || | ||| Sbjct 1253532 GGAATTCCTTCCTTATCTTGAATCTTTGCCTTCACATTTTCAATAGTGTCAGAAGGTTCA 1253473 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| | || || ||||| ||||| | ||||| | || |||||||| Sbjct 1253472 ACTTCCAATGTGATCGTTTTGCCAGTAAGAGTTTTCACGAAAATCTGCAT 1253423 Score = 136 bits (150), Expect = 8e-27 Identities = 171/232 (74%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATC 192365 ||||| || | ||| || | || || || | ||||| || ||| || ||||| ||||| Sbjct 1254336 ATACCTCCACGAAGTCGGAGGACCAAGTGGAGAGTAGATTCCTTTTGA-ATATTGTAATC 1254278 Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425 ||| | ||| ||| |||| |||||||| || ||||||||||| | | || ||||| || Sbjct 1254277 AGAAAGTGTGCGTCCATCTTCCAATTGCTTTCCAGCAAAGATAAGACGTTGCTGATCTGG 1254218 Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485 || |||||||| ||||| || |||||| || ||||| || | ||| || | ||| Sbjct 1254217 GGGAATTCCTTCCTTATCCTGAATTTTAGCCTTAACATTTTCGATGGTATCGGATGGTTC 1254158 Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 ||||| | || || ||||||||||| || ||||| | || ||||||||| Sbjct 1254157 GACTTCCAATGTTATCGTTTTACCAGTCAAAGTTTTCACGAAGATCTGCATT 1254106 Score = 132 bits (146), Expect = 9e-26 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || ||||| | ||||| | || | ||| | ||| | ||| || ||| || ||||| Sbjct 1254108 ATTCCACCACGTAGACGCAGAACCAGATGGAGAGTTGACTCCTTTTGGATGTTGTAATCG 1254049 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || || || || |||| || ||||||||||| |||||||| | || || ||||| ||| Sbjct 1254048 GACAAAGTGCGACCATCCTCTAATTGTTTACCGGCAAAGATGAGTCGTTGCTGATCCGGT 1253989 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || || |||||||| || ||| ||| ||||| || | ||| || | || Sbjct 1253988 GGGATACCCTCCTTATCTTGGATCTTAGCTTTAACATTCTCAATGGTATCGGATGGCTCG 1253929 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 ||||| ||||| || ||||| ||||| ||||| || | ||| ||||||||| Sbjct 1253928 ACTTCCAGAGTGATAGTTTTGCCAGTCAATGTCTTTACAAAGATCTGCATT 1253878 Score = 131 bits (144), Expect = 3e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||| || | ||| | | ||| || || | ||| | ||| || || ||||| || Sbjct 1254792 ATACCTCCACGAAGTCTCAGTACCAAGTGGAGAGTGGACTCCTTCTGAATGTTATAGTCG 1254733 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | ||| ||| | || |||||||| || |||||||| ||||||||||| || || || Sbjct 1254732 GAAAGTGTGCGTCCGTCTTCCAATTGCTTGCCAGCAAAAATTAATCTCTGCTGGTCTGGG 1254673 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| ||||| || || ||| || ||||| |||| || || | ||| Sbjct 1254672 GGGATGCCTTCCTTATCCTGAATCTTAGCCTTCACATTTTCAATAGTGTCAGAAGGTTCA 1254613 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| | |||||| ||||| ||||| || || |||| ||| |||||||| Sbjct 1254612 ACTTCCAAAGTAATCGTTTTGCCAGTCAACGTCTTAACAAAAATCTGCAT 1254563 Score = 122 bits (134), Expect = 2e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||| ||||| | | | || | ||| | |||| |||||| |||||| ||||| Sbjct 1253196 ATACCTCCTCTCAATCTCAGCACAAGATGAAGGGTAGACTCTTTTTGGATATTGTAATCG 1253137 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | ||| || |||| ||||| ||||| ||||||||||| | | ||||||||| ||| Sbjct 1253136 GAGAGTGTACGACCATCCTCCAACTGTTTTCCAGCAAAGATAAGACGCTGTTGATCTGGT 1253077 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || ||||| ||||| |||||| ||| ||||| || | ||| || | ||| Sbjct 1253076 GGAATGCCCTCTTTGTCTTGAATTTTAGCTTTCACATTCTCAATTGTATCAGAGGGTTCA 1253017 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| | || || || || ||||| | ||||| | || || ||||| Sbjct 1253016 ACTTCCAAGGTGATCGTCTTGCCAGTAAGAGTTTTCACGAAAATTTGCAT 1252967 Score = 118 bits (130), Expect = 2e-21 Identities = 168/234 (72%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATC 192365 || || || | |||||| | || ||||||| || | ||| ||| || || |||||||| Sbjct 1252968 ATCCCTCCACGAAGACGAAGGACCAAATGTAGGGTCGACTCCTTTTGA-ATGTTATAATC 1252910 Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425 ||| | || || |||| || | ||||| ||||||||||| ||||| || || || || Sbjct 1252909 AGACAGCGTGCGACCATCTTCTAGCTGTTTGCCAGCAAAGATCAATCTTTGCTGGTCTGG 1252850 Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485 || ||||| |||||||| || || ||| || || || || | ||| || | || Sbjct 1252849 AGGAATTCCCTCTTTATCCTGAATCTTAGCCTTAACGTTTTCAATGGTATCAGAAGGCTC 1252790 Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 ||||| | || || ||||| || |||| ||| || | ||| ||||||||||| Sbjct 1252789 AACTTCCAAGGTGATAGTTTTGCCTGTTAGTGTCTTCACAAAGATCTGCATTTT 1252736 Score = 100 bits (110), Expect = 6e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || ||||| | || || | ||| ||||| | ||| | || || ||| ||||| || Sbjct 1255020 ATTCCACCACGGAGGCGAAGTACCAAATGGAGAGTGGATTCCTTCTGGATGTTATAGTCG 1254961 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || || || || | || |||||||| |||||||||||||| | | |||||||| || Sbjct 1254960 GACAAAGTGCGACCGTCTTCCAATTGCTTACCAGCAAAGATAAGACGTTGTTGATCTGGA 1254901 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||| || || || || || || || || | ||||||| ||| Sbjct 1254900 GGAATCCCTTCTTTGTCCTGAATCTTGGCCTTAACGTTCTCAATTGTGTCTGACGGTTCA 1254841 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || | ||| || ||||| || ||||| || || | || || ||||| Sbjct 1254840 ACCTCCAAAGTGATAGTTTTGCCGGTTAAAGTCTTCACGAAGATTTGCAT 1254791 >seq170 Length=322284 Score = 122 bits (134), Expect = 2e-22 Identities = 178/249 (71%), Gaps = 2/249 (1%) Strand=Plus/Minus Query 49818 ATTAAACATGCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAA 49877 |||||||| |||||||| |||||| || ||||| | ||||||| ||| || |||| Sbjct 24245 ATTAAACAAGCAAAATCGCAATGTAAGCCTTCGTCACGGGATATAAGTTCGTTGGAAAAA 24186 Query 49878 GTTAATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAA 49937 || | || ||||| | || ||||| || ||||| || |||||||||||||| | | Sbjct 24185 GTCAGACCAGGCATAATGCCCCTCTTCTTGAGCCAGAAAATTGATGCAAAACTGCCACTG 24126 Query 49938 AAGAATATACCCTCGACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTA-TC 49996 ||||| || |||||||| ||||| || ||||||||| | || || |||| | | | Sbjct 24125 AAGAAGATTCCCTCGACTGCAGCAAAAGCAATTATTCTTTCACCGAA-ATTAGCTGACTT 24067 Query 49997 ATCTAATATCCAATTTATAGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTAT 50056 | |||||||| || ||||| || || || ||||| | | | |||| |||| || Sbjct 24066 GCTTGATATCCAAGCCATGGCCCAGTCAGCCTTCTTTTTAACACAGGGTAAGGTTTCAAT 24007 Query 50057 AGCTTTAAA 50065 || || || Sbjct 24006 TGCGTTGAA 23998 >seq44 Length=1094211 Score = 118 bits (130), Expect = 2e-21 Identities = 136/183 (74%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413 |||||| || || || | ||| || |||| ||||||||||||||||||||||| | | Sbjct 805524 GATATTGTAGTCGGACAGTGTACGACCATCCTCCAATTGTTTACCAGCAAAGATCAGACG 805465 Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473 |||||||| || || || |||||||||||||| || || ||| ||||| |||| Sbjct 805464 TTGTTGATCTGGGGGAATACCTTCTTTATCTTGAATCTTTGCTTTGACATTTTCAATAGT 805405 Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533 ||| || | ||| || || ||||| ||||| || || |||| || || | || || || Sbjct 805404 ATCAGAGGGTTCGACCTCAAGAGTGATGGTCTTGCCCGTTAGGGTCTTTACGAAAATTTG 805345 Query 192534 CAT 192536 ||| Sbjct 805344 CAT 805342 >seq39 Length=1160777 Score = 116 bits (128), Expect = 7e-21 Identities = 170/239 (71%), Gaps = 1/239 (0%) Strand=Plus/Minus Query 192304 ATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAA 192363 ||||||||||||| ||||| | || || || | |||| ||| || ||| || ||| Sbjct 535155 ATAATACCACCTCGGAGACGGAGCACCAAGTGCAGGGTAGACTCCTTCTGGATGTTGTAA 535096 Query 192364 TCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCA 192423 || || | ||| || |||| || | |||||||| || || || | | ||||||||| Sbjct 535095 TCGGAAAGTGTGCGACCATCCTCAAGCTGTTTACCGGCGAAAATCAGACGCTGTTGATCT 535036 Query 192424 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGAT 192483 || || ||||| || || || || || || ||| ||||| |||| ||||| | Sbjct 535035 GGGGGGATTCCCTCCTTGTCCTGGATCTTCGCTTTGACATTTTCAATAGTGTCTGAGGGC 534976 Query 192484 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT-TTTAT 192541 || || || ||||| ||||| ||||| |||| ||||| | || |||||||| ||||| Sbjct 534975 TCGACCTCAAGAGTGATGGTCTTACCGGTTAGGGTTTTTACGAAGATCTGCATGTTTAT 534917 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984294642413250