Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq52 141 3e-28 seq8 114 4e-20 seq28 107 6e-18 seq129 104 7e-17 seq170 102 2e-16 seq13 86.0 2e-11 >seq52 Length=1010276 Score = 141 bits (156), Expect = 3e-28 Identities = 226/322 (70%), Gaps = 2/322 (1%) Strand=Plus/Minus Query 289023 ttttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGC 289082 |||| | ||||| ||||| ||||| |||||||| | | || |||| ||| | || || Sbjct 930984 TTTTCTGCCAACTGCATCTATTTCATCAATGAATAGAATGCAAGGAGCATTCTTCCTAGC 930925 Query 289083 AATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTC 289142 |||||||| | |||| || || || | || | ||||||| |||| || | |||||| Sbjct 930924 CATTGCAAACATATCTCGAACTCGAGAAGGGCCCACACCAACAAACATCTCCAAAAATTC 930865 Query 289143 AGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAG 289202 || | |||||| | ||| | ||||| ||||| || ||| ||| | |||| ||| Sbjct 930864 TGACCCTGATACTGTTAAGAAAGGAACATTCGCTTCACCAGCTGTGGCCTTAGCCAAAAG 930805 Query 289203 TGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGC 289262 |||||| ||||||||||| ||||| | | | ||||||| || | ||| || || Sbjct 930804 TGTCTTCCCTGTTCCAGGAGGTCCGGTCAGGATAGCTCCCTTAGGAATTTTAGCGCC-TA 930746 Query 289263 AGAC-TTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTG 289321 || | | |||| | || ||||||| || | ||||| ||| || |||| || | Sbjct 930745 AGTCAATGTATTGTTGTGGATTCTTTAAGAAATTTACAAACTCCATAATTTCAATCTTAG 930686 Query 289322 CCTCATCACATCCTGCTACATC 289343 | || ||||| ||||||||||| Sbjct 930685 CTTCTTCACAGCCTGCTACATC 930664 >seq8 Length=2576095 Score = 114 bits (126), Expect = 4e-20 Identities = 210/306 (69%), Gaps = 4/306 (1%) Strand=Plus/Minus Query 302574 TTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGT 302633 ||||||| ||| || | | |||||| || ||||||||| || ||||||||||| || Sbjct 1040646 TTCCATAGCCTTTATGAGCCTACGCTGGATGTAACCAGTTTCAGCAGTTTTTACAGCAGT 1040587 Query 302634 ATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCC 302693 |||||| ||||| |||| ||||||||||| ||||| | | || || || || Sbjct 1040586 ATCAATAAGACCTTCACGGCCACCCATAGCGTGGAAATAAAATTCAGATGGAGTAAGACC 1040527 Query 302694 CCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAA 302753 | | | | || |||| ||||| || | || ||| || || ||| |||| | || Sbjct 1040526 GGCCAGATATGAATTCTCTACGAATCCCCTCGACTCAGGACCATAATCGTCCTTGATGAA 1040467 Query 302754 GTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTG 302813 || |||| || | || | | ||||| || ||||| || || || ||||||||||| Sbjct 1040466 ATGAGGCAATGTGCGCTTGCGAAAACCGTAGGGAATACGTTTACCCTCCACGTTCTGCTG 1040407 Query 302814 TCCCAGGCACGAAATCATCTGCGAAATATTTAAATCACTG--CCCTTGGAGCCAGCATTT 302871 ||| | || | ||| | ||| || ||||| ||| || || ||||| |||| | Sbjct 1040406 TCCGACACAAGCAATAACCTGGGAGATATT--AATGTTTGAACCTTTGGAACCAGAAACG 1040349 Query 302872 ACCATA 302877 |||||| Sbjct 1040348 ACCATA 1040343 >seq28 Length=1376228 Score = 107 bits (118), Expect = 6e-18 Identities = 227/337 (67%), Gaps = 4/337 (1%) Strand=Plus/Plus Query 289021 CtttttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTC 289080 |||||| ||||| | ||||||||| ||||| || || ||||| |||| || | | Sbjct 773197 CTTTTTGCTCCAACGGAATCAATTTCATCAATAAATATAACACATGGAGCTTTATTCTTT 773256 Query 289081 GCA--ATTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAA 289138 ||| ||| |||||| |||| | | ||||| | |||||| | | ||| | Sbjct 773257 GCAGCATT--AAATAAATCTCGAATTCTTTTGGCTCCCTGTCCAACAAAGACTTCATTGA 773314 Query 289139 ATTCAGAAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCA 289198 |||| || ||| ||||| |||| ||| ||||| || || || || | || | Sbjct 773315 ATTCTGATCCGGCCGTTTGAAAAAATGGGACACCAGCTTCTCCGGCAACAGCTCGAGCTA 773374 Query 289199 GAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCC 289258 | || || |||||||| |||||||| | | ||||| || ||||||| ||| | | Sbjct 773375 ATAAAGTTTTTCCTGTTCCTGGTGGTCCAACGAGAAGAACACCTTTTGGTAATTTACCGC 773434 Query 289259 CAGCAGACTTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATT 289318 | | | ||||||||| || | || || ||||||||||||||| | ||| | || Sbjct 773435 CTAAATTCGAATATTTCTCTGGATTTTTCAAGTATTCTACAATTTCCTGCAATTCTTCTT 773494 Query 289319 TTGCCTCATCACATCCTGCTACATCAGCAAAAGTAAT 289355 | || |||||||| || |||||| |||| || || Sbjct 773495 TAGCTTCATCACACCCCTTAACATCATCAAAGGTTAT 773531 >seq129 Length=486951 Score = 104 bits (114), Expect = 7e-17 Identities = 152/211 (72%), Gaps = 3/211 (1%) Strand=Plus/Minus Query 252489 AACAAGCGGTCTCATCGGGTAAGATAGAACATATGCTGTCTTATCCATCCTATTATCATA 252548 ||| || ||| ||||||| || | | ||||| |||| ||||||||| || | Sbjct 203689 AACCAGAGGTTTCATCGGATAGTACAAAACATGTGCTAAAGTATCCATCCGTACATGGAA 203630 Query 252549 ATTTGTAACATACATACCAAGCGCCTGCTTTCCCATAGCACTCTGGTAAGTATTTCTGGG 252608 |||||||| |||| ||| | || || || ||||||||||| |||||||| || ||||| Sbjct 203629 ATTTGTAATGTACACACCCATAGCTTGTTTACCCATAGCACTTTGGTAAGTGTTCCTGGG 203570 Query 252609 AGACTGATTGTTTTCCGGGAAAGGAATGCATGATGCTACA-ACACCGAAGATAGTGCTTG 252667 | ||| |||| || ||||| ||||| ||||| ||| || || | || | || Sbjct 203569 ACTCTGGTTGTGATCTGGGAACGGAATAATCGATGC-ACAGACGCCCAGAATCATCGCTG 203511 Query 252668 GGTGAATTTCACAGTGACTGTAA-TGATACA 252697 |||||||||||||||| | ||| || |||| Sbjct 203510 GGTGAATTTCACAGTGCGTATAAGTGGTACA 203480 Score = 84.2 bits (92), Expect = 6e-11 Identities = 110/147 (75%), Gaps = 8/147 (5%) Strand=Plus/Minus Query 251845 ATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGTCCATCA 251904 || ||||||||| ||||| ||||| |||||||| |||||||| || | || || || Sbjct 204472 ATGGTCATACGAGATGGAATTGCATGAGGATTGATTATGATGTCCGGGGTAAGACCTTC- 204414 Query 251905 GCAG-TGAAGGGCATATCCTTTTCCT--CAATAATG-TTTCCAATAGTTCCCTTTTGTCC 251960 |||| |||||||||| ||| |||| | ||| || | ||| |||||||||||| || Sbjct 204413 GCAGGTGAAGGGCATGTCC---TCCTGACGATATTGAATACCACAAGTTCCCTTTTGCCC 204357 Query 251961 GTGACGAGAACTGAACTTATCACCAAT 251987 ||| || || |||||| || || || Sbjct 204356 GTGGCGCGAGGCGAACTTGTCTCCGAT 204330 >seq170 Length=322284 Score = 102 bits (112), Expect = 2e-16 Identities = 162/226 (72%), Gaps = 10/226 (4%) Strand=Plus/Plus Query 133415 CTATTCAACGCCATTAGCGAA---TTTCCTTGTATTAAAAAGAAATCTGACTGGGCTATT 133471 || |||||||| ||| ||| || || ||| |||||||||| |||||||||| || Sbjct 23995 CTCTTCAACGCAATT---GAAACCTTACCCTGTGTTAAAAAGAAGGCTGACTGGGCCATG 24051 Query 133472 AAATGGATC-CAGGACAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGT 133530 ||||| || | |||| || | ||| | | | | |||||||||||| ||| Sbjct 24052 GCTTGGATATCAAG-CAAGTCAGCTAATTTCGGTGAAAGAATAATTGCTTTTGCTGCAGT 24110 Query 133531 AGAGGGCAtttttttCAGTGGTGCGTTCTGC-TCTATTTTTTGGCTTAAAAAGCGTGGTA 133589 ||||| || || |||||||| ||| ||| || ||||| ||||| || ||| | || | Sbjct 24111 CGAGGGAATCTTCTTCAGTGG-CAGTTTTGCATCAATTTTCTGGCTCAAGAAGAGGGGCA 24169 Query 133590 TTCTACCTGGACTGTGTTTTTCTAACGAACTTATTTCAAGGGACGA 133635 || | ||||| ||| |||||| ||||||||||| || | ||||| Sbjct 24170 TTATGCCTGGTCTGACTTTTTCCAACGAACTTATATCCCGTGACGA 24215 >seq13 Length=2077869 Score = 86.0 bits (94), Expect = 2e-11 Identities = 115/160 (72%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 155587 CAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATTCTACAATCTCAC 155646 ||||||| |||| ||||||||| || | || | | || | ||| |||||||| || Sbjct 1820492 CAATAGAGGCCAAATTACATACGGCTATTTCGTCGGCGGCCGAGTACTCTACAATTTCTG 1820433 Query 155647 AGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAG 155706 ||| || || || || || || || | ||||| ||||||| || ||||| || | Sbjct 1820432 TGCATAGATTGCTACATTTAATAGTCCCGATATTCTGCTGGTTACTCTTTCTGTTGCATG 1820373 Query 155707 CATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTG 155746 | |||||||||| || || || ||||||||||| | ||| Sbjct 1820372 CGTCCTTGTATAACATATAAGGAGTTCCTGTCTCTACCTG 1820333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471540486642215