Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq4706 132 6e-25 seq5 109 7e-18 >seq4706 Length=1216 Score = 132 bits (146), Expect = 6e-25 Identities = 153/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| ||||| ||| ||| | || ||||||||||||||||||||||| | || Sbjct 289 GCTTGGCGAGTTCTCCGGGCAGCAGGAGTCGCACGGCGGTCTGGATCTCGCGGCTCGTGA 230 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||||| | || ||||| || ||||| | | ||||||| |||| | Sbjct 229 TTGTGGACCGCTTGTTGTAATGGGCCAGCCGCGAAGCCTCAGCGGCGATGCGCTCGAAGA 170 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| || || || |||||||| ||||| ||| |||||||||| |||||||| Sbjct 169 TGTCATTCACGAAACTGTTCATGATGCTCATCGCCTTCGAGGAGATGCCCGTGTCGGGGT 110 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||| | |||||||||||| Sbjct 109 GGACCTGCTTCAATACCTTGTAGATG 84 >seq5 Length=2773134 Score = 109 bits (120), Expect = 7e-18 Identities = 141/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 1592106 AGAAGCGCACCGACGACATCTCGCCGTGGGACAAGGAGTTTTGCGACGTCGAGCAGCCCA 1592165 |||||||||| |||||||||||| |||||||| || || | ||||| || || Sbjct 2652995 AGAAGCGCACAGACGACATCTCGTCGTGGGACGCCGACTTCCTTAAGGTCGACCAAGGCA 2653054 Query 1592166 CCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTG 1592225 |||| || ||| | ||| | || ||||||||| | |||||||| |||||||| || Sbjct 2653055 CCCTATTCGAGCTTATCTTAGCAGCCAACTACTTGGACATCAAAGGACTGCTCGACGTTA 2653114 Query 1592226 GGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCT 1592285 || || | || || |||||||| || |||||| |||| || || || | ||||| | Sbjct 2653115 CTTGTAAAACGGTAGCAAACATGATTAAAGGCAAGACGCCAGACGAAATTAGGAAGACAT 2653174 Query 1592286 TTAACATCAAGTACG 1592300 | || || ||| ||| Sbjct 2653175 TCAATATTAAGAACG 2653189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6105933259483315