Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq4706 156 7e-32 seq5 102 1e-15 >seq4706 Length=1216 Score = 156 bits (172), Expect = 7e-32 Identities = 179/241 (74%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||| ||||| ||||| ||||| ||||| ||||||||| |||| ||||| ||| ||| Sbjct 328 TGTATTTGGTAACGGCTTTGGTTCCCTCGCTCACGGCGTGCTTGGCGAGTTCTCCGGGCA 269 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | || |||||||||||||||||||||||| | ||| ||| |||||||| Sbjct 268 GCAGGAGTCGCACGGCGGTCTGGATCTCGCGGCTCGTGATTGTGGACCGCTTGTTGTAAT 209 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | ||||| || ||||| | | ||||||| |||| ||||| || || || ||||| Sbjct 208 GGGCCAGCCGCGAAGCCTCAGCGGCGATGCGCTCGAAGATGTCATTCACGAAACTGTTCA 149 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||||| || |||||||||| ||||||||| |||||||| | ||||||| Sbjct 148 TGATGCTCATCGCCTTCGAGGAGATGCCCGTGTCGGGGTGGACCTGCTTCAATACCTTGT 89 Query 1485710 A 1485710 | Sbjct 88 A 88 >seq5 Length=2773134 Score = 102 bits (112), Expect = 1e-15 Identities = 140/196 (71%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 2035566 GACAAGCGCACCGACGACATTTCGCCGTGGGACAAGGCCTTTTGCGAGGTCGACCAACCC 2035625 || |||||||| |||||||| ||| |||||||| | ||| ||||||||||| | Sbjct 2652994 GAGAAGCGCACAGACGACATCTCGTCGTGGGACGCCGACTTCCTTAAGGTCGACCAAGGC 2653053 Query 2035626 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTG 2035685 ||||| || ||| | ||| | || ||||||||| | |||||||| || ||||| | Sbjct 2653054 ACCCTATTCGAGCTTATCTTAGCAGCCAACTACTTGGACATCAAAGGACTGCTCGACGTT 2653113 Query 2035686 GGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACC 2035745 || || || || || ||| | || || |||||| |||| || || || | ||||| Sbjct 2653114 ACTTGTAAAACGGTAGCAAACATGATTAAAGGCAAGACGCCAGACGAAATTAGGAAGACA 2653173 Query 2035746 TTTAACATCAAGTACG 2035761 || || || ||| ||| Sbjct 2653174 TTCAATATTAAGAACG 2653189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7914683225826105