Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq39 118 7e-22 seq44 100 2e-16 seq10 98.7 6e-16 >seq39 Length=1160777 Score = 118 bits (130), Expect = 7e-22 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | ||| ||||||||| ||||| || || || || |||| |||| Sbjct 535134 AGCACCAAGTGCAGGGTAGACTCCTTCTGGATGTTGTAATCGGAAAGTGTGCGACCATCC 535075 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || || || |||||||| ||||| || || || ||| | || | ||||||||||| Sbjct 535074 TCAAGCTGTTTACCGGCGAAAATCAGACGCTGTTGATCTGGGGGGATTCCCTCCTTGTCC 535015 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | | || | || || |||||| |||| || |||||| Sbjct 535014 TGGATCTTCGCTTTGACATTTTCAATAGTGTCTGAGGGCTCGACCTCAAGAGTGATGGTC 534955 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || || || ||||| ||||| |||||||||||| Sbjct 534954 TTACCGGTTAGGGTTTTTACGAAGATCTGCATG 534922 >seq44 Length=1094211 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | ||| ||||| || || || ||||| || || | || |||| Sbjct 805553 AGCACCAAGTGGAGGGTTGATTCCTTTTGGATATTGTAGTCGGACAGTGTACGACCATCC 805494 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| ||| || || || |||||||| ||||| || ||| | || | || || || || Sbjct 805493 TCCAATTGTTTACCAGCAAAGATCAGACGTTGTTGATCTGGGGGAATACCTTCTTTATCT 805434 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || ||| |||||| | | || | ||| || ||||| |||| || |||||| Sbjct 805433 TGAATCTTTGCTTTGACATTTTCAATAGTATCAGAGGGTTCGACCTCAAGAGTGATGGTC 805374 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || ||||| ||||||||||| || || |||||| Sbjct 805373 TTGCCCGTTAGGGTCTTTACGAAAATTTGCATG 805341 >seq10 Length=2329298 Score = 98.7 bits (108), Expect = 6e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| || | ||| |||||| ||||||||||| || || || |||| |||| Sbjct 1252950 AGGACCAAATGTAGGGTCGACTCCTTTTGAATGTTATAATCAGACAGCGTGCGACCATCT 1252891 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || || || || || ||||||| || |||||||||| | || | ||||| || || Sbjct 1252890 TCTAGCTGTTTGCCAGCAAAGATCAATCTTTGCTGGTCTGGAGGAATTCCCTCTTTATCC 1252831 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || ||| | | || | ||| | ||| || || | ||| || || Sbjct 1252830 TGAATCTTAGCCTTAACGTTTTCAATGGTATCAGAAGGCTCAACTTCCAAGGTGATAGTT 1252771 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || || ||||| |||||||||||||| Sbjct 1252770 TTGCCTGTTAGTGTCTTCACAAAGATCTGCAT 1252739 Score = 98.7 bits (108), Expect = 6e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||||| ||| ||| ||||| || || ||||| |||| ||||| |||| Sbjct 1254546 AGCACCAAGTGAAGGGTCGACTCTTTCTGGATATTGTAGTCAGATAATGTGCGCCCATCC 1254487 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| ||| || || || || |||| |||||||| ||| | || | || || ||||| Sbjct 1254486 TCCAATTGTTTACCAGCAAAAATCAAACGTTGCTGATCTGGTGGAATGCCTTCTTTGTCT 1254427 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || || | | || | ||| || |||||| || | ||| |||||| Sbjct 1254426 TGAATCTTAGCCTTTACATTTTCAATAGTGTCAGAGGGCTCGACTTCCAAGGTGATGGTC 1254367 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || | ||||||||||| || ||||| Sbjct 1254366 TTCCCAGTTAAAGTCTTTACAAAAATTTGCAT 1254335 Score = 86.0 bits (94), Expect = 4e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | |||| |||||||||||| ||||| || |||| | | || |||| Sbjct 1253634 AGTACCAAGTGGAGGGTGGACTCCTTCTGAATATTATAATCAGATAAGGTACGGCCATCC 1253575 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| ||| || || || ||||| ||||||||||| ||| | || | || ||||| || Sbjct 1253574 TCCAATTGTTTCCCAGCAAAGATGAGTCGTTGCTGATCTGGAGGAATTCCTTCCTTATCT 1253515 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || ||| || || | | || | ||| | || || || | || || || Sbjct 1253514 TGAATCTTTGCCTTCACATTTTCAATAGTGTCAGAAGGTTCAACTTCCAATGTGATCGTT 1253455 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || || || || || || |||||||| Sbjct 1253454 TTGCCAGTAAGAGTTTTCACGAAAATCTGCAT 1253423 Score = 82.4 bits (90), Expect = 5e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822 ||||| |||| ||| | ||| ||||||||||||||||||||| || || |||| | Sbjct 1254777 CTCAGTACCAAGTGGAGAGTGGACTCCTTCTGAATGTTATAGTCGGAAAGTGTGCGTCCG 1254718 Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882 || |||| |||||| || || || || | || ||||||||| | || | || ||||| Sbjct 1254717 TCTTCCAATTGCTTGCCAGCAAAAATTAATCTCTGCTGGTCTGGGGGGATGCCTTCCTTA 1254658 Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 || | || || || || | | || | ||| | || || || | || || Sbjct 1254657 TCCTGAATCTTAGCCTTCACATTTTCAATAGTGTCAGAAGGTTCAACTTCCAAAGTAATC 1254598 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || || | ||||| ||||| |||||||| Sbjct 1254597 GTTTTGCCAGTCAACGTCTTAACAAAAATCTGCAT 1254563 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325634469946205