Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq10 89.7 4e-13 seq44 82.4 6e-11 >seq10 Length=2329298 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 |||||||||||||| || |||||||| || || ||||| ||| | ||| ||| | Sbjct 1254335 ATGCAAATTTTTGTAAAGACTTTAACTGGGAAGACCATCACCTTGGAAGTCGAGCCCTCT 1254394 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || ||| | | | ||||| |||||| || ||||||||| | || |||||| Sbjct 1254395 GACACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAAGAAGGCATTCCACCAGATCAG 1254454 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 || | | |||| ||| |||||||| ||||||| | ||| | | |||||||| Sbjct 1254455 CAACGTTTGATTTTTGCTGGTAAACAATTGGAGGATGGGCGCACATTATCTGACTACAAT 1254514 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 || || || ||||| || | ||| ||||| | | ||||||| || Sbjct 1254515 ATCCAGAAAGAGTCGACCCTTCACTTGGTGCTTCGCCTGCGAGGAGG 1254561 >seq44 Length=1094211 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||||||||| || || || |||| ||||| ||||| || | || || | Sbjct 805342 ATGCAAATTTTCGTAAAGACCCTAACGGGCAAGACCATCACTCTTGAGGTCGAACCCTCT 805401 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 |||||| | | | || ||| ||||||| ||||||||||| | ||| ||||| Sbjct 805402 GATACTATTGAAAATGTCAAAGCAAAGATTCAAGATAAAGAAGGTATTCCCCCAGATCAA 805461 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 || | || || | ||| |||||||| ||||||| | ||| || | |||||||| Sbjct 805462 CAACGTCTGATCTTTGCTGGTAAACAATTGGAGGATGGTCGTACACTGTCCGACTACAAT 805521 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTG 107765 || |||||||| || || | ||| ||||| Sbjct 805522 ATCCAAAAGGAATCAACCCTCCACTTGGTG 805551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398805363034855