Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq44 127 3e-24 seq10 123 4e-23 >seq44 Length=1094211 Score = 127 bits (140), Expect = 3e-24 Identities = 153/208 (74%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| |||| || |||| || || || || ||| |||| || |||| | Sbjct 805343 TGCAAATTTTCGTAAAGACCCTAACGGGCAAGACCATCACTCTTGAGGTCGAACCCTCTG 805402 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||||||| ||||||| ||| || || ||| ||||||||| ||||| || ||||||| Sbjct 805403 ATACTATTGAAAATGTCAAAGCAAAGATTCAAGATAAAGAAGGTATTCCCCCAGATCAAC 805462 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | || || ||||| ||||||||||| || ||| | | || | | || || |||| Sbjct 805463 AACGTCTGATCTTTGCTGGTAAACAATTGGAGGATGGTCGTACACTGTCCGACTACAATA 805522 Query 146212 TACAAAAAGAATCGACTATCCATTTAGT 146239 | ||||| ||||| || |||| || || Sbjct 805523 TCCAAAAGGAATCAACCCTCCACTTGGT 805550 >seq10 Length=2329298 Score = 123 bits (136), Expect = 4e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || |||||||| | || || ||||||||||| | || || || | | | Sbjct 1253196 TGCAGATTTTTGTAAAAACACTGACTGGGAAAACAATTACATTAGAAGTTGAGCCTTCTG 1253255 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| ||||||| ||| ||||| ||| ||||||||| ||||| || ||||||| Sbjct 1253256 ATACAATTGAAAATGTGAAAGCCAAAATCCAAGATAAAGAAGGTATTCCTCCAGATCAAC 1253315 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | | | |||||||| |||||||| | || ||| | | || | | || ||||| | Sbjct 1253316 AGCGTTTGATTTTTGCTGGTAAACAGCTTGAGGATGGTCGTACTCTCTCCGACTATAACA 1253375 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | || || ||||| ||| | |||||||| |||| | | ||||||| Sbjct 1253376 TTCAGAAGGAATCCACTCTACATTTAGTTCTACGTCTTCGCGGAGGTA 1253423 Score = 123 bits (136), Expect = 4e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || |||| ||||| || || ||||| || ||| | || || || | || Sbjct 1253880 TGCAGATCTTTGTAAAGACATTGACTGGCAAAACTATCACTCTGGAAGTCGAGCCATCCG 1253939 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| | ||||| ||| ||| || ||| ||| || || || ||||| ||||| | Sbjct 1253940 ATACCATTGAGAATGTTAAAGCTAAGATCCAAGATAAGGAGGGTATCCCACCGGATCAGC 1253999 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || ||||||| ||||| |||||||||||||| ||| | | || || | ||||| || | Sbjct 1254000 AACGACTCATCTTTGCCGGTAAACAATTAGAGGATGGTCGCACTTTGTCCGATTACAACA 1254059 Query 146212 TACAAAAAGAATCGACTATCCAT 146234 | ||||| || || ||| ||||| Sbjct 1254060 TCCAAAAGGAGTCAACTCTCCAT 1254082 Score = 118 bits (130), Expect = 2e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || |||| || ||||| || || || || || | || || || | | Sbjct 1254336 TGCAAATTTTTGTAAAGACTTTAACTGGGAAGACCATCACCTTGGAAGTCGAGCCCTCTG 1254395 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | |||||| |||||||||| ||| || ||| ||||||||||||||||| ||||| | Sbjct 1254396 ACACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAAGAAGGCATTCCACCAGATCAGC 1254455 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | | |||||||| ||||||||||| || ||| | || ||| | || || |||| Sbjct 1254456 AACGTTTGATTTTTGCTGGTAAACAATTGGAGGATGGGCGCACATTATCTGACTACAATA 1254515 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | || ||||| ||||| | || || || | || | ||||||||| Sbjct 1254516 TCCAGAAAGAGTCGACCCTTCACTTGGTGCTTCGCCTGCGAGGAGGTA 1254563 Score = 116 bits (128), Expect = 6e-21 Identities = 154/214 (72%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | ||||| | || || ||||| || || | || || |||| | | Sbjct 1253424 TGCAGATTTTCGTGAAAACTCTTACTGGCAAAACGATCACATTGGAAGTTGAACCTTCTG 1253483 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | |||||| ||||||| || || || ||| ||| ||||| ||||| || ||||| | Sbjct 1253484 ACACTATTGAAAATGTGAAGGCAAAGATTCAAGATAAGGAAGGAATTCCTCCAGATCAGC 1253543 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || ||||||| ||||| || |||||||| || ||| | || ||| | |||||||||| Sbjct 1253544 AACGACTCATCTTTGCTGGGAAACAATTGGAGGATGGCCGTACCTTATCTGATTATAATA 1253603 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACG 146245 | || || || || || |||| || ||| |||| Sbjct 1253604 TTCAGAAGGAGTCCACCCTCCACTTGGTACTACG 1253637 Score = 114 bits (126), Expect = 2e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| | ||||| | || || || || || || | || || |||| | Sbjct 1252968 TGCAAATTTTCGTGAAAACTCTTACTGGCAAGACGATCACCTTGGAAGTTGAACCCTCTG 1253027 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| | ||||| ||| |||||| ||| ||||| ||||||||||| ||||||| Sbjct 1253028 ATACAATTGAGAATGTGAAAGCTAAAATTCAAGACAAAGAGGGCATTCCACCAGATCAAC 1253087 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | | || || ||||| || ||||| || || ||| | | || | | ||||| |||| Sbjct 1253088 AGCGTCTTATCTTTGCTGGAAAACAGTTGGAGGATGGTCGTACACTCTCCGATTACAATA 1253147 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | |||||||| || || | ||| | || | |||| |||||||||| Sbjct 1253148 TCCAAAAAGAGTCTACCCTTCATCTTGTGCTGAGATTGAGAGGAGGTA 1253195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786021991059400