Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_023848.1 Length=163023 Score E Sequences producing significant alignments: (Bits) Value seq3509 95.1 1e-14 seq3563 89.7 5e-13 >seq3509 Length=1415 Score = 95.1 bits (104), Expect = 1e-14 Identities = 168/243 (69%), Gaps = 3/243 (1%) Strand=Plus/Minus Query 106864 TCAAATGGCGCTTCCACCTTGTCATTGTCTTGTCCAATTCTATGTGCGCAACAATACCCA 106923 ||| ||||| ||||| ||||| ||||| || ||||| |||||||| |||| | | Sbjct 1321 TCAGATGGCTCTTCCGCCTTGCCATTGCCTCGTCCAGTTCTATGTT-GCAAACGGAG--A 1265 Query 106924 TCTAGATTGCCAGTTGTACCAAAGATCCGCCGATATTGGGCTCGGAGTCCCGTTCAACAT 106983 ||| |||||| | || || || || ||||| || || || || ||||| || ||||| Sbjct 1264 GCTATCGTGCCAGCTCTATCAGAGGTCTGCCGACATGGGACTGGGGGTCCCTTTTAACAT 1205 Query 106984 CGCCAGCTACTCATTTCTAATGTACGTTTTGGCAAAATGGACAAATCTGACCCCAGGACG 107043 |||||||||| | |||| | ||| | | || | ||| ||| || ||| Sbjct 1204 CGCCAGCTACGCCCTTCTTACTTACATGGTTGCTCACGTCACAGGCTTGAAGCCTGGAGA 1145 Query 107044 TTTTATCCATACGTTTGGAGACGTGCATGTGTACTCGACTCATGTTGAAGCTTTGAGGGA 107103 |||| ||||||| |||||||| | ||||| || || ||| ||||| | ||| || Sbjct 1144 TTTTGTCCATACCTTTGGAGATGCTCATGTATATCTGAATCACATTGAACCGTTGCAAGA 1085 Query 107104 GCA 107106 ||| Sbjct 1084 GCA 1082 >seq3563 Length=1406 Score = 89.7 bits (98), Expect = 5e-13 Identities = 167/243 (69%), Gaps = 3/243 (1%) Strand=Plus/Plus Query 106864 TCAAATGGCGCTTCCACCTTGTCATTGTCTTGTCCAATTCTATGTGCGCAACAATACCCA 106923 ||| ||||| ||||| ||||| || || || ||||| |||||||| |||| | | Sbjct 95 TCAGATGGCTCTTCCGCCTTGCCACTGCCTCGTCCAGTTCTATGTT-GCAAACGGAG--A 151 Query 106924 TCTAGATTGCCAGTTGTACCAAAGATCCGCCGATATTGGGCTCGGAGTCCCGTTCAACAT 106983 ||| |||||| | || || || || ||||| || || || || ||||| || ||||| Sbjct 152 GCTATCGTGCCAGCTCTATCAGAGGTCTGCCGACATGGGACTGGGGGTCCCTTTTAACAT 211 Query 106984 CGCCAGCTACTCATTTCTAATGTACGTTTTGGCAAAATGGACAAATCTGACCCCAGGACG 107043 |||||||||| | |||| | ||| | | || | ||| ||| || ||| Sbjct 212 CGCCAGCTACGCCCTTCTTACTTACATGGTTGCTCACGTCACAGGCTTGAAGCCTGGAGA 271 Query 107044 TTTTATCCATACGTTTGGAGACGTGCATGTGTACTCGACTCATGTTGAAGCTTTGAGGGA 107103 |||| ||||||| |||||||| | ||||| || || ||| ||||| | ||| || Sbjct 272 TTTTGTCCATACCTTTGGAGATGCTCATGTATATCTGAATCACATTGAACCGTTGCAAGA 331 Query 107104 GCA 107106 ||| Sbjct 332 GCA 334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521449798592600