Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq10 201 2e-46 seq44 176 9e-39 seq39 145 1e-29 seq408 104 5e-17 >seq10 Length=2329298 Score = 201 bits (222), Expect = 2e-46 Identities = 174/216 (81%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| || || ||||| || || || || ||||| |||||||||||||||| | | || Sbjct 1253638 ACGTAGTACCAAGTGGAGGGTGGACTCCTTCTGAATATTATAATCAGATAAGGTACGGCC 1253579 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 || || | |||||| ||||||||||| |||| ||| ||||||||||| ||||||||||| Sbjct 1253578 ATCCTCCAATTGTTTCCCAGCAAAGATGAGTCGTTGCTGATCTGGAGGAATTCCTTCCTT 1253519 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774 ||||||||||||||| || ||||||||||| || ||| |||||| |||||||| || || Sbjct 1253518 ATCTTGAATCTTTGCCTTCACATTTTCAATAGTGTCAGAAGGTTCAACTTCCAATGTGAT 1253459 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||| ||||| || | || || || || |||||||| Sbjct 1253458 CGTTTTGCCAGTAAGAGTTTTCACGAAAATCTGCAT 1253423 Score = 197 bits (218), Expect = 3e-45 Identities = 181/229 (79%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 ||||||| | | | ||| || ||||| ||||| || || ||||| || ||||| || | Sbjct 1254791 TACCTCCACGAAGTCTCAGTACCAAGTGGAGAGTGGACTCCTTCTGAATGTTATAGTCGG 1254732 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | || | | |||||||| | ||| || |||||||| |||| ||| || || ||||| | Sbjct 1254731 AAAGTGTGCGTCCGTCTTCCAATTGCTTGCCAGCAAAAATTAATCTCTGCTGGTCTGGGG 1254672 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || ||||||||||| |||||||| || || ||||||||||| || ||| |||||| | Sbjct 1254671 GGATGCCTTCCTTATCCTGAATCTTAGCCTTCACATTTTCAATAGTGTCAGAAGGTTCAA 1254612 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||||||| ||||| ||||| ||||||||||| ||||| |||||||| Sbjct 1254611 CTTCCAAAGTAATCGTTTTGCCAGTCAACGTCTTAACAAAAATCTGCAT 1254563 Score = 190 bits (210), Expect = 4e-43 Identities = 180/230 (78%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 ||||||| | | || || || ||||| ||||||||||| || || ||||| ||||||| Sbjct 1254335 TACCTCCACGAAGTCGGAGGACCAAGTGGAGAGTAGATTCCTTTTGAATATTGTAATCAG 1254276 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | || | | || ||||| | ||| |||||||||||||| || | ||| |||||||| | Sbjct 1254275 AAAGTGTGCGTCCATCTTCCAATTGCTTTCCAGCAAAGATAAGACGTTGCTGATCTGGGG 1254216 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | |||||||||||||| ||||| || || || |||||||| || ||||| ||||| | Sbjct 1254215 GAATTCCTTCCTTATCCTGAATTTTAGCCTTAACATTTTCGATGGTATCGGATGGTTCGA 1254156 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 ||||||| |||||||| || || ||||| || || || || ||||||||| Sbjct 1254155 CTTCCAATGTTATCGTTTTACCAGTCAAAGTTTTCACGAAGATCTGCATT 1254106 Score = 187 bits (206), Expect = 5e-42 Identities = 178/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 ||||| | | ||| || || || || || || || || || || || ||||||||||| Sbjct 1252965 CCTCCACGAAGACGAAGGACCAAATGTAGGGTCGACTCCTTTTGAATGTTATAATCAGAC 1252906 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | ||| |||||||| ||||| ||||||||||| | |||||| || |||||||| Sbjct 1252905 AGCGTGCGACCATCTTCTAGCTGTTTGCCAGCAAAGATCAATCTTTGCTGGTCTGGAGGA 1252846 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 ||||| || ||||| |||||||| || || || |||||||| |||||| ||| || ||| Sbjct 1252845 ATTCCCTCTTTATCCTGAATCTTAGCCTTAACGTTTTCAATGGTATCAGAAGGCTCAACT 1252786 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 ||||| || || || |||||||| | ||||| ||||| ||||||||| Sbjct 1252785 TCCAAGGTGATAGTTTTGCCTGTTAGTGTCTTCACAAAGATCTGCATT 1252738 Score = 183 bits (202), Expect = 6e-41 Identities = 178/229 (78%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 ||||||| | | ||| |||||||| || ||||| ||||| ||||| || ||||| || | Sbjct 1253423 TACCTCCGCGAAGACGTAGAACTAAATGTAGAGTGGATTCCTTCTGAATGTTATAGTCGG 1253364 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | ||| | | ||| || || || ||||| |||||||| || | | ||||||||||||| Sbjct 1253363 AGAGAGTACGACCATCCTCAAGCTGTTTACCAGCAAAAATCAAACGCTGTTGATCTGGAG 1253304 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || ||||| |||||||| || || ||||| ||||||||||| |||||| ||| || | Sbjct 1253303 GAATACCTTCTTTATCTTGGATTTTGGCTTTCACATTTTCAATTGTATCAGAAGGCTCAA 1253244 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| || || || || || || |||| || |||||||| |||||||| Sbjct 1253243 CTTCTAATGTAATTGTTTTCCCAGTCAGTGTTTTTACAAAAATCTGCAT 1253195 Score = 179 bits (198), Expect = 7e-40 Identities = 162/204 (79%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 |||| || || || ||||| || |||||||| || ||| | | || || || |||||| Sbjct 1255221 TGCAAGGTTGACTCCTTCTGGATGTTATAATCGGACAGAGTGCGGCCATCCTCGAGTTGT 1255162 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || || ||||| || | | ||| ||||||||||| |||||||||||||| || || || Sbjct 1255161 TTACCGGCAAAAATCAAACGTTGCTGATCTGGAGGAATTCCTTCCTTATCCTGGATTTTA 1255102 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 || || ||||||||||| |||||| |||||| ||||||||||| ||||| || || ||| Sbjct 1255101 GCCTTGACATTTTCAATGGTATCAGAAGGTTCAACTTCCAAAGTGATCGTTTTACCCGTC 1255042 Query 82788 AACGTCTTTACAAATATCTGCATT 82811 || ||||| ||||| ||||||||| Sbjct 1255041 AAGGTCTTCACAAAAATCTGCATT 1255018 Score = 176 bits (194), Expect = 9e-39 Identities = 169/217 (78%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||||||||| | || ||||| || || || || || || ||||| || | | | | ||| Sbjct 1254094 ACGCAGAACCAGATGGAGAGTTGACTCCTTTTGGATGTTGTAATCGGACAAAGTGCGACC 1254035 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 || |||| |||||| || |||||||| |||| ||| ||||| || || || || ||||| Sbjct 1254034 ATCCTCTAATTGTTTACCGGCAAAGATGAGTCGTTGCTGATCCGGTGGGATACCCTCCTT 1253975 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774 |||||| ||||| ||||| ||||| ||||| ||||| || || ||||||| ||| || Sbjct 1253974 ATCTTGGATCTTAGCTTTAACATTCTCAATGGTATCGGATGGCTCGACTTCCAGAGTGAT 1253915 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 || ||||| ||||| ||||||||||| ||||||||| Sbjct 1253914 AGTTTTGCCAGTCAATGTCTTTACAAAGATCTGCATT 1253878 Score = 174 bits (192), Expect = 3e-38 Identities = 176/229 (77%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 ||||||||||||| | ||| || | || || ||||| ||||| || ||||| ||||| | Sbjct 1253195 TACCTCCTCTCAATCTCAGCACAAGATGAAGGGTAGACTCTTTTTGGATATTGTAATCGG 1253136 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | || | | ||| || || | ||||||||||||||||| || | ||||||||||| | Sbjct 1253135 AGAGTGTACGACCATCCTCCAACTGTTTTCCAGCAAAGATAAGACGCTGTTGATCTGGTG 1253076 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || || || |||||||| || ||||| ||||| ||||| |||||| ||||| | Sbjct 1253075 GAATGCCCTCTTTGTCTTGAATTTTAGCTTTCACATTCTCAATTGTATCAGAGGGTTCAA 1253016 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||||| || ||||||||||| || | || || || || || ||||| Sbjct 1253015 CTTCCAAGGTGATCGTCTTGCCAGTAAGAGTTTTCACGAAAATTTGCAT 1252967 Score = 174 bits (192), Expect = 3e-38 Identities = 176/229 (77%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 ||||||||| || || || || ||||| || || || |||||||| ||||| || |||| Sbjct 1254563 TACCTCCTCGCAGGCGAAGCACCAAGTGAAGGGTCGACTCTTTCTGGATATTGTAGTCAG 1254504 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 ||| | | || || || | |||||| |||||||| || | | ||| |||||||| | Sbjct 1254503 ATAATGTGCGCCCATCCTCCAATTGTTTACCAGCAAAAATCAAACGTTGCTGATCTGGTG 1254444 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || ||||| || ||||||||||| || |||||||||||||| || ||| || || | Sbjct 1254443 GAATGCCTTCTTTGTCTTGAATCTTAGCCTTTACATTTTCAATAGTGTCAGAGGGCTCGA 1254384 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||||| || || ||||| || || || ||||||||||| || ||||| Sbjct 1254383 CTTCCAAGGTGATGGTCTTCCCAGTTAAAGTCTTTACAAAAATTTGCAT 1254335 Score = 158 bits (174), Expect = 2e-33 Identities = 164/215 (76%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || || || || || ||||| ||||| ||||| || ||||| || || | | | | |||| Sbjct 1255005 CGAAGTACCAAATGGAGAGTGGATTCCTTCTGGATGTTATAGTCGGACAAAGTGCGACCG 1254946 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 ||||| | ||| || ||||||||||| || | ||||||||||||||| || ||||| || Sbjct 1254945 TCTTCCAATTGCTTACCAGCAAAGATAAGACGTTGTTGATCTGGAGGAATCCCTTCTTTG 1254886 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 || |||||||| || || || || ||||| || || ||||| || |||||||| || Sbjct 1254885 TCCTGAATCTTGGCCTTAACGTTCTCAATTGTGTCTGACGGTTCAACCTCCAAAGTGATA 1254826 Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || ||||| || || ||||| || || || ||||| Sbjct 1254825 GTTTTGCCGGTTAAAGTCTTCACGAAGATTTGCAT 1254791 Score = 140 bits (154), Expect = 6e-28 Identities = 161/217 (74%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||||||||||| || || || || || || || || || ||||| || | | | | ||| Sbjct 1253866 ACGCAGAACTAGATGAAGTGTTGACTCCTTTTGGATGTTGTAATCGGACAAAGTGCGACC 1253807 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 ||||| | || || || |||||||| | || ||| |||||||| || || ||||| || Sbjct 1253806 ATCTTCCAACTGCTTACCGGCAAAGATCAATCGTTGCTGATCTGGTGGAATACCTTCTTT 1253747 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774 || || || || || || ||||| || |||||||| ||||| || ||||| || || Sbjct 1253746 GTCCTGGATTTTAGCCTTAACATTCTCGATCGTATCTGATGGTTCAACCTCCAATGTAAT 1253687 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 ||||| || ||||| ||||| || || ||||||||| Sbjct 1253686 TGTCTTACCGGTCAAAGTCTTAACGAAAATCTGCATT 1253650 >seq44 Length=1094211 Score = 176 bits (194), Expect = 9e-39 Identities = 168/215 (78%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || || || ||||| || || ||||| || || ||||| || || || || | | ||| Sbjct 805556 CGAAGCACCAAGTGGAGGGTTGATTCCTTTTGGATATTGTAGTCGGACAGTGTACGACCA 805497 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 || || | |||||| ||||||||||| || | |||||||||||| || || ||||| ||| Sbjct 805496 TCCTCCAATTGTTTACCAGCAAAGATCAGACGTTGTTGATCTGGGGGAATACCTTCTTTA 805437 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 ||||||||||||||||| ||||||||||| |||||| ||||| || || | ||| || Sbjct 805436 TCTTGAATCTTTGCTTTGACATTTTCAATAGTATCAGAGGGTTCGACCTCAAGAGTGATG 805377 Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||||| || | |||||||| || || ||||| Sbjct 805376 GTCTTGCCCGTTAGGGTCTTTACGAAAATTTGCAT 805342 >seq39 Length=1160777 Score = 145 bits (160), Expect = 1e-29 Identities = 173/235 (74%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| |||| | ||| || || |||||||| ||||| || ||||| || || ||||| | Sbjct 535151 TACCACCTCGGAGACGGAGCACCAAGTGCAGGGTAGACTCCTTCTGGATGTTGTAATCGG 535092 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | || | | ||| || || || ||||| || || || || || | ||||||||||| | Sbjct 535091 AAAGTGTGCGACCATCCTCAAGCTGTTTACCGGCGAAAATCAGACGCTGTTGATCTGGGG 535032 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | ||||| ||||| || || ||||| ||||| ||||||||||| || || || || | Sbjct 535031 GGATTCCCTCCTTGTCCTGGATCTTCGCTTTGACATTTTCAATAGTGTCTGAGGGCTCGA 534972 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTATTAT 82816 | || | ||| || ||||| || || | || ||||| || |||||||| |||| Sbjct 534971 CCTCAAGAGTGATGGTCTTACCGGTTAGGGTTTTTACGAAGATCTGCATGTTTAT 534917 >seq408 Length=31413 Score = 104 bits (114), Expect = 5e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 198327 ACACATGACCCTCTATGGAATGCATCGCAAATACAGATGATAAGAGAAGGAAAAATGCAT 198386 || || ||| ||| |||||| | | || || ||| | | | |||||| ||||||||| Sbjct 25635 ACTCACGACGATCTCTGGAATTCTGCCCAGATCCAGCTTGTCAAAGAAGGGAAAATGCAT 25576 Query 198387 AGTTTTTTAAGAATGTACTGGGCTAAAAAGATACTTGAATGGACAAGAACACCGGAAGAC 198446 | ||||| || ||||||||||| ||||| || || |||||||| | | || ||| | Sbjct 25575 GGCTTTTTGAGGATGTACTGGGCCAAAAAAATTCTCGAATGGACTGAATCTCCAGAACAA 25516 Query 198447 GCTTTGAGTTATAGTATCTATCTAAACAATAAGTACGAACTAGACGGCACGGATCCTAAC 198506 || ||| ||| ||| ||||| ||| |||||||| | || || ||||| || Sbjct 25515 GCATTGGAATATTCTATTTATCTCAACGATAAGTACAGTTTGGATGGACAAGATCCAAAT 25456 Query 198507 GGATACGTAGGT 198518 |||||||||||| Sbjct 25455 GGATACGTAGGT 25444 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981642341881605