Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq112 100 5e-16 seq408 98.7 2e-15 >seq112 Length=609800 Score = 100 bits (110), Expect = 5e-16 Identities = 156/223 (70%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 52110 TTTGTAACCGTGCACCATTTTTTAGATTTTGTATCGTAGCATCCCATAAGAAAACTGGAT 52169 ||||| ||||| |||| || | |||| |||| ||||||||||||| ||| || | Sbjct 466832 TTTGTTACCGTCTTCCATAAATTTGTTTTTTTATCTAAGCATCCCATAAGGAAAATGCTT 466773 Query 52170 AGAATACCAGATTTATTACCTTTTCCGTAATAAGCACCCAGAACTACTAGATCAGCTTTA 52229 | || ||| | | || || |||| || ||||||| |||||||||| ||| || | Sbjct 466772 AACATGCCACCTGTTTTTCCGGTTCCATACCAAGCACCGAGAACTACTAAATCTGCAGTG 466713 Query 52230 TCTGCCATAATACAACCATCTAAGTAGTCtttttttATTTTCAGCCATCTACGCATACCA 52289 |||||||| | ||| | ||| |||||||| ||||||| ||| | || |||| Sbjct 466712 TCTGCCATTTGTCCTCCAAAGAGGTAATCTTTTTTAATTTTCATCCAACCTCGTTTACCT 466653 Query 52290 GGTTCGTATACACCTTTTGCATCTTTGAGTACAAATCCTTCTA 52332 || | ||| || || ||| |||||| || || ||||||| Sbjct 466652 GGATGATATTGACTATTCACATTTTTGAGGACTAAGCCTTCTA 466610 >seq408 Length=31413 Score = 98.7 bits (108), Expect = 2e-15 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 183010 ACACATGACCCTCTATGGAATGCATCACAAATACAGATGATGAGAGAAGGAAAAATGCAT 183069 || || ||| ||| |||||| | | || || ||| | | | |||||| ||||||||| Sbjct 25635 ACTCACGACGATCTCTGGAATTCTGCCCAGATCCAGCTTGTCAAAGAAGGGAAAATGCAT 25576 Query 183070 AGTTTTTTACGAATGTACTGGGCTAAAAAGATACTTGAATGGACAAGAACTCCGGAAGAT 183129 | ||||| | ||||||||||| ||||| || || |||||||| | |||| ||| | Sbjct 25575 GGCTTTTTGAGGATGTACTGGGCCAAAAAAATTCTCGAATGGACTGAATCTCCAGAACAA 25516 Query 183130 GCTTTGAGTTATAGTATCTATATGAACAATAAGTACGAACTAGACGGTACGGATCCTAAC 183189 || ||| ||| ||| ||| | ||| |||||||| | || || ||||| || Sbjct 25515 GCATTGGAATATTCTATTTATCTCAACGATAAGTACAGTTTGGATGGACAAGATCCAAAT 25456 Query 183190 GGATACGTAGGT 183201 |||||||||||| Sbjct 25455 GGATACGTAGGT 25444 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903245254655200