Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq13 210 2e-49 seq39 125 7e-24 seq10 100 3e-16 >seq13 Length=2077869 Score = 210 bits (232), Expect = 2e-49 Identities = 941/1465 (64%), Gaps = 42/1465 (3%) Strand=Plus/Minus Query 148317 GGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGGCATGTACGCT 148376 || ||||| ||||| |||||||| | ||| || | || | ||| |||||||| ||| Sbjct 1821000 GGCTCAAAGGACTCATTGTTGCCAAGAATTTGTGAAGTAGATGCTGTGGGCATCGGCGCC 1820941 Query 148377 ACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGCTTCAGAGCCGCCCAGTCC 148436 | | || || || | | || | |||||||| ||| || ||||||||||| Sbjct 1820940 AATAACAAGGAATTCCTAACGCCATACTGCTTTATTTTCTCCTTAAGCTCCGCCCAGTCC 1820881 Query 148437 CAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAGAATGCCGCGGCT-AGCGGG 148495 || | | || || || |||||| |||||||| || || || ||| | ||| Sbjct 1820880 CATAAATTGGTGGGCGTTTTGTCCCACATATCGTACTGGAGTATTCCTTTGCTGACCGGC 1820821 Query 148496 GCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGTTCGCAGCTCGCCTCGAG 148555 | | |||||||| | ||||||||| | || ||||||||||| || || || Sbjct 1820820 GAT-CCCTCGTAGGTTTCGTACGGTCCAAATTCTTTAGCTAGTTCGCAGCTGGCTTCAAG 1820762 Query 148556 CGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCAGCGCCGCCGACTCGCTTTC 148615 || ||||||||||| || || ||| ||| || | ||| ||||||||| Sbjct 1820761 GGCTCCGTAGTAAATAGTTTCAAAAATCTGCTGATTCAATTTTTGAGCCTCCTCGCTTTC 1820702 Query 148616 GTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGCCCACGCCAATGGG 148675 ||| || ||||| | | | || | || || | ||| || || || | |||||| || Sbjct 1820701 GTAGGGGTAACGCATCAGAATGAATGTATCAGCCATGCCTTGCACACCTATGCCAATCGG 1820642 Query 148676 CCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCG-AGCGGATAGTGGTTGCGGTCGATGA 148734 ||||| || |||||||| || ||| | | |||||||| ||| ||||| | Sbjct 1820641 GCGGTGCTTCATGTTGGACTTCTTAGC-TTCTGGCATCGGATAGTAGTTAATATCGATAA 1820583 Query 148735 TCTTGTCAAGATTGCGCACCACCACCTTTGTAATTCTGCGCAGCAAT---TCAAAATCGT 148791 |||||| ||||| | | ||| || |||| |||| | |||| | || || | Sbjct 1820582 TCTTGTTTAGATTCCTCGTCACTGTTTTAGTAA--CTGC-CTTCAATTTCTGGAAGTCAT 1820526 Query 148792 ACTTGTCATC------TACGATGCATCGGTTCACGGCGATAGAGGCTAGATTGCACACGG 148845 |||| | || |||| ||| ||||| || |||||||| | ||| || |||| Sbjct 1820525 ACTTCTTTTCCGGCGTGACGA-ACAT--GTTCAACGCAATAGAGGCCAAATTACATACGG 1820469 Query 148846 CCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCA 148905 | | || || | ||| ||||||||| || || | ||| |||||||| ||||| || Sbjct 1820468 CTATTTCGTCGGCGGCCGAGTACTCTACAATTTCTGTGCATAGATTGCTACATTTAATAG 1820409 Query 148906 CGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTC 148965 || | |||| || || ||||| |||||||| ||||||||||| | ||| || || Sbjct 1820408 TCCCGATATTCTGCTGGTTACTCTTTCTGTTGCATGCGTCCTTGTATAACATATAAGGAG 1820349 Query 148966 CGCCAGTTTCCACCTGCGTTTCCACTAT---GAACCGATGCAGGTCCTGCGCGCGCA-CT 149021 || || || ||||| | ||| | ||| |||| || | |||| || || || Sbjct 1820348 TTCCTGTCTCTACCTGAGATTCAATTATAGCAAACCACAGCTG--CCTG-GCCTTCACCT 1820292 Query 149022 TGCTGCTCGTAGCGACCCTCCTGCTCGTATAAAGTATACAGCCGCTCGAACGCCTCGCCG 149081 | ||| | | | || ||||| | ||||||| || || ||| ||||| || || Sbjct 1820291 TCCTGTTGGCA-CGCCCCTCGTTCTCGTATTTTGTGTATAGCTCTTCGAATTTATCACCC 1820233 Query 149082 TAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATGAGCGACCACACGCCGTCCGCG 149141 | || ||| | || || || | || ||||| | ||||| | | || || Sbjct 1820232 CACACCTCAAAGAGGTCAGGACATTTATTTGGACACATCAAAGACCAGTCTTCATCTGCC 1820173 Query 149142 TACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCTTG 149201 | || | ||||||||| ||||| || | |||||| ||||| | | |||||| || | Sbjct 1820172 TCGACCCTCTTCATAAAGAGATCCGGAATCCAGAGTGCGTAAAATAAGTCGCGAGCACGG 1820113 Query 149202 CAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGCACGCTGAATATGTCCGCGTGCCAC 149261 ||||| ||||| |||| |||||| || | || | || || ||||| Sbjct 1820112 TGCTCTTCTGCGCCAGTGTTCTTCTTCAGGTTCAGAAACTCAAAGACATCTGCATGCCAG 1820053 Query 149262 GGCTCAATGTACACCGCGAGCGCGCCCTTGCG---CTTGCCGCCCTGGTCGACGTGGCGC 149318 ||||| | ||| | |||| || || || || || |||||||| || | Sbjct 1820052 GGCTCCAAGTAAATAGCGAAGGCCCCGGGACGTTTATTTCCTCCCTGGTCAACATACTTT 1819993 Query 149319 ACCATGTTGTTAAACACTCGAACCATAGGTTCAATGCCACTGGCAGTGCCGTTAGT-AGA 149377 | | |||||||||||| | | ||| || | | ||| | | |||| || || | Sbjct 1819992 GCAACGTTGTTAAACACCCTCAACATGGGAACGAGACCATTAGATATGCCATTTGTGCCA 1819933 Query 149378 GCTAATGCGACTGCCGCGCGCTCGCACTTTGTGCACGTTGACGCCGATGCCGCCGCCGTA 149437 |||| || | | || |||||| | || ||||| | |||||| || || ||| Sbjct 1819932 GCTATAGC-AGTTCCCTTCGCTCGGATACAATGGACGTTTAAGCCGATTCCTCCTGCGTT 1819874 Query 149438 CTTTGAGATGGCCGCGCAGTCGC-CGAGCGTCGAGTAGATGCCCTCGATGCTGTCGCGCT 149496 ||| ||||| |||||| ||| | | | | | |||| ||||| || || Sbjct 1819873 CTTCGAGATCATAGCGCAG-CGCTCCACAGACTTGAAGATTCCCTCAATTGAATCCTCGA 1819815 Query 149497 TCATGGTCAGCAGAAAGCACGAGCACATTTGCGGAAAACGCGTGCCGGCCGCGAAC-ATG 149555 |||||||| ||||| |||||| | | ||| ||| ||| || | || |||||| ||| Sbjct 1819814 CCATGGTCAATAGAAAACACGAGGAGAGTTGTGGACGACGTGTCGCAGCTGCGAACAATG 1819755 Query 149556 GTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCATCATCTCGTACGACTCGAGCACGCGG 149615 ||||| | || || || |||||||| | | | | ||||| |||| || Sbjct 1819754 TTGGGGAT-GCATGAGTGAAATATTTTTCCGAAAGGAGGTTGTACGTTTCGATTGCGGCA 1819696 Query 149616 TCCATGTCATCGCCATGGATGCCTATGGCGACGCGCATCAGCATATGCTGCGGTCGCTCC 149675 || || || || || || || || | | || | ||||| ||| ||||| ||||| || Sbjct 1819695 TCGATATCTTCACCGTGAATTCCGACTGAAACTCTCATCAACATGTGCTGAGGTCGTTCG 1819636 Query 149676 GCCACTTTGTTTCCA---ATTTTGAGCAAGTAGCCGTTTTCTAGTGTCTTGTAGCCAAAG 149732 || | | || ||| ||||| | | ||| |||| || || || |||| ||| Sbjct 1819635 GCGA---TTTTACCATTGATTTTTAAAAGATAGGACCTTTCGAGAGTTTTAAAGCCGAAG 1819579 Query 149733 TACTTGTAGTCAAAGTCGCGGCCGT 149757 || ||||| | ||||||||| ||| Sbjct 1819578 TAGTTGTAATTGAAGTCGCGGTCGT 1819554 >seq39 Length=1160777 Score = 125 bits (138), Expect = 7e-24 Identities = 154/208 (74%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||| ||||| ||||| || ||||||||| | ||| ||| | ||||| || Sbjct 535128 AAGTGCAGGGTAGACTCCTTCTGGATGTTGTAATCGGAAAGTGTGCGACCA-TCCTCAAG 535070 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||| || || ||| |||| || ||||| || || || ||||| || |||||||| ||| Sbjct 535069 CTGTTTACCGGCGAAAATCAGACGCTGTTGATCTGGGGGGATTCCCTCCTTGTCCTGGAT 535010 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| |||| | |||| ||||| | |||||| || || | |||| ||| || || Sbjct 535009 CTTCGCTTTGACATTTTCAATAGTGTCTGAGGGCTCGACCTCAAGAGTGATGGTCTTACC 534950 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCATG 133661 ||| || ||||||||||| ||||||||| Sbjct 534949 GGTTAGGGTTTTTACGAAGATCTGCATG 534922 >seq10 Length=2329298 Score = 100 bits (110), Expect = 3e-16 Identities = 149/207 (72%), Gaps = 6/207 (3%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGC 133514 ||| | ||| |||||||| || |||||||||||| | ||| |||| ||||| | | Sbjct 1253170 ATGAAGGGTAGACTCTTTTTGGATATTGTAATCG--GAGAGTGTACGACCATCCTCCAAC 1253113 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 || || || || | || || ||||| || || || || ||||| || ||||| ||| Sbjct 1253112 TGTTTTCCAGCAAAGATAAGACGCTGTTGATCTGGTGGAATGCCCTCTTTGTC-TTGAAT 1253054 Query 133575 TTTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| || || | | ||||| || || | ||| || || || | ||||| || ||||| Sbjct 1253053 TTTAGCTTTCACATTCTCAATTGTATCAGAGGGTTCAACTTCCAAGGTGATCGTCTTGCC 1252994 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 || |||||||| |||||||| ||||| Sbjct 1252993 AGTAAGAGTTTTCACGAAAATTTGCAT 1252967 Score = 96.9 bits (106), Expect = 3e-15 Identities = 147/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||||||||| ||||| ||||| ||||| | || | | | ||||| | Sbjct 1253628 AAGTGGAGGGTGGACTCCTTCTGAATATTATAATCAGATAAGGTACGGCCA-TCCTCCAA 1253570 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 || || || || | ||||| || ||||| || ||||| || |||||||| || || Sbjct 1253569 TTGTTTCCCAGCAAAGATGAGTCGTTGCTGATCTGGAGGAATTCCTTCCTTATCTTGAAT 1253510 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 |||| ||| | | |||| ||||| | || || || || | |||| |||||||| Sbjct 1253509 CTTTGCCTTCACATTTTCAATAGTGTCAGAAGGTTCAACTTCCAATGTGATCGTTTTGCC 1253450 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 || |||||||| |||||||||||||| Sbjct 1253449 AGTAAGAGTTTTCACGAAAATCTGCAT 1253423 Score = 87.8 bits (96), Expect = 2e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 || || | ||| ||||||||||| |||||||| || | ||| | ||||| | Sbjct 1254540 AAGTGAAGGGTCGACTCTTTCTGGATATTGTAGTCAGATAATGTGCGCCCATCCTCCAAT 1254481 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 || || || || |||| | || ||||| || || || |||||||| ||||| ||| Sbjct 1254480 TGTTTACCAGCAAAAATCAAACGTTGCTGATCTGGTGGAATGCCTTCTTTGTCTTGAATC 1254421 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||| | | |||| ||||| | |||||| || || | ||||| ||| || || Sbjct 1254420 TTAGCCTTTACATTTTCAATAGTGTCAGAGGGCTCGACTTCCAAGGTGATGGTCTTCCCA 1254361 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 || | ||| ||||| ||||| ||||| Sbjct 1254360 GTTAAAGTCTTTACAAAAATTTGCAT 1254335 Score = 84.2 bits (92), Expect = 2e-11 Identities = 143/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||| ||||| ||||| || || |||||| || ||| | | | |||||||| | Sbjct 1255222 ATGCAAGGTTGACTCCTTCTGGATGTTATAATCGGACAGAGTGCGGCCA-TCCTCGAGTT 1255164 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 | || || || |||| | || ||||| || ||||| || |||||||| || ||| | Sbjct 1255163 GTTTACCGGCAAAAATCAAACGTTGCTGATCTGGAGGAATTCCTTCCTTATCCTGGATTT 1255104 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||||| | |||| || || | || || || || | |||| ||||| || | Sbjct 1255103 TAGCCTTGACATTTTCAATGGTATCAGAAGGTTCAACTTCCAAAGTGATCGTTTTACCCG 1255044 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 ||| || || || ||||||||||| Sbjct 1255043 TCAAGGTCTTCACAAAAATCTGCAT 1255019 Score = 82.4 bits (90), Expect = 7e-11 Identities = 146/208 (70%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||||| ||||| || ||||| || || || ||| | || ||| | ||||| || Sbjct 1253400 AAATGTAGAGTGGATTCCTTCTGAATGTTATAGTCGGAGAGAGTACGACCA-TCCTCAAG 1253342 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||| || || || |||| | ||||| || || ||||| || ||||| || || ||| Sbjct 1253341 CTGTTTACCAGCAAAAATCAAACGCTGTTGATCTGGAGGAATACCTTCTTTATCTTGGAT 1253282 Query 133574 CTTTTGCTTGAGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 ||| |||| | | |||| || || | ||||| || || | || | ||||| | Sbjct 1253281 -TTTGGCTTTCACATTTTCAATTGTATCAGAAGGCTCAACTTCTAATGTAATTGTTTTCC 1253223 Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660 | ||||| |||||||| ||||||||||| Sbjct 1253222 CAGTCAGTGTTTTTACAAAAATCTGCAT 1253195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483332001641800