Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq10 123 6e-23 >seq10 Length=2329298 Score = 123 bits (136), Expect = 6e-23 Identities = 150/202 (74%), Gaps = 2/202 (1%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| || || || || |||||||| |||||||| ||| ||||| ||| | || Sbjct 1252982 AAAACTCTTACTGGCAAGACGATCACCTTGGAAGTTGAACCCTCTGATACAATTGAGAAT 1253041 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||||| ||| |||||||| ||||| || ||| || || || | |||||||| Sbjct 1253042 GTGAAAGCTAAA-ATTCAAGACAAAGAGGGCATTCCACCAGATCAACAGCGTCTTATCTT 1253100 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || ||||| |||||||| ||||| | || | |||||||||| |||| |||||||| Sbjct 1253101 TGCTGGAAAACAGTTGGAGGATGGTCGTACACTCTCCGATTACAATATCCAAAAAGAGTC 1253160 Query 206364 TACTCTTCACCTTGTTTTGAGA 206385 ||| ||||| ||||| ||||| Sbjct 1253161 TACCCTTCATCTTGTGCTGAGA 1253182 Score = 118 bits (130), Expect = 3e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || ||| | || || |||||||| ||||||||||| ||| ||||||| Sbjct 1254566 CAGATTTTTGTTAAGACGTTGACTGGCAAAACGATTACTTTGGAAGTTGAACCTTCTGAC 1254625 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | ||| || ||| |||||||| || || ||||| || || ||| || Sbjct 1254626 ACTATTGAAAATGTGAAGGCTAAGATTCAGGATAAGGAAGGCATCCCCCCAGACCAGCAG 1254685 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||| | || || || || ||||| |||||||| ||| | || | |||| || ||| | Sbjct 1254686 AGATTAATTTTTGCTGGCAAGCAATTGGAAGACGGACGCACACTTTCCGACTATAACATT 1254745 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||| ||||| ||||| ||| | || |||||||||| Sbjct 1254746 CAGAAGGAGTCCACTCTCCACTTGGTACTGAGACTTCG 1254783 Score = 116 bits (128), Expect = 9e-21 Identities = 139/189 (74%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| || || || ||||||||||| |||||||| ||| ||||||||| | ||| Sbjct 1253438 AAAACTCTTACTGGCAAAACGATCACATTGGAAGTTGAACCTTCTGACACTATTGAAAAT 1253497 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| |||||||||||| || ||||||||| || || ||| |||| ||||| Sbjct 1253498 GTGAAGGCAAAGATTCAAGATAAGGAAGGAATTCCTCCAGATCAGCAACGACTCATCTTT 1253557 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || || || ||||| ||||| | || || | ||||| || | ||||| ||||| Sbjct 1253558 GCTGGGAAACAATTGGAGGATGGCCGTACCTTATCTGATTATAATATTCAGAAGGAGTCC 1253617 Query 206365 ACTCTTCAC 206373 || || ||| Sbjct 1253618 ACCCTCCAC 1253626 Score = 107 bits (118), Expect = 5e-18 Identities = 131/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || ||||| ||||||||||| || ||| || |||||| | || || ||| Sbjct 1254815 ACCGGCAAAACTATCACTTTGGAGGTTGAACCGTCAGACACAATTGAGAACGTTAAGGCC 1254874 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 |||||||| || |||||||| ||| || || ||| | |||||||| || || ||| Sbjct 1254875 AAGATTCAGGACAAAGAAGGGATTCCTCCAGATCAACAACGTCTTATCTTTGCTGGTAAG 1254934 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCA 206372 || |||||||| || | |||||| |||| || ||| ||||||| || || ||||| || Sbjct 1254935 CAATTGGAAGACGGTCGCACTTTGTCCGACTATAACATCCAGAAGGAATCCACTCTCCA 1254993 Score = 105 bits (116), Expect = 2e-17 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| | || || |||||||| || |||||||| ||| || || || ||||| Sbjct 1254122 AAAACTTTGACTGGTAAAACGATAACATTGGAAGTCGAACCATCCGATACCATCGAAAAT 1254181 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| || ||||| || || ||||||||| || || ||| | |||||||| Sbjct 1254182 GTTAAGGCTAAAATTCAGGATAAGGAAGGAATTCCCCCAGATCAGCAACGTCTTATCTTT 1254241 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || |||||||| |||||||||||| | || | | |||||||| | || || || ||| Sbjct 1254242 GCTGGAAAGCAATTGGAAGATGGACGCACACTTTCTGATTACAATATTCAAAAGGAATCT 1254301 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||| ||| | || | ||||||| Sbjct 1254302 ACTCTCCACTTGGTCCTCCGACTTCG 1254327 Score = 104 bits (114), Expect = 6e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || || || || || ||||| || ||| || || || |||| || ||| Sbjct 1253675 ACCGGTAAGACAATTACATTGGAGGTTGAACCATCAGATACGATCGAGAATGTTAAGGCT 1253734 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 || || || || |||||||| ||| || || ||| || | ||||| ||||| ||| Sbjct 1253735 AAAATCCAGGACAAAGAAGGTATTCCACCAGATCAGCAACGATTGATCTTTGCCGGTAAG 1253794 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 |||||||||||||| | |||||| ||||||||||| |||| || ||||| || ||||| Sbjct 1253795 CAGTTGGAAGATGGTCGCACTTTGTCCGATTACAACATCCAAAAGGAGTCAACACTTCAT 1253854 Query 206374 CTTGTTTTGAGACTTCG 206390 || ||| || | || || Sbjct 1253855 CTAGTTCTGCGTCTACG 1253871 Score = 102 bits (112), Expect = 2e-16 Identities = 154/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || || | || || |||||||||||||||||||| ||| |||||| Sbjct 1255022 CAGATTTTTGTGAAGACCTTGACGGGTAAAACGATCACTTTGGAAGTTGAACCTTCTGAT 1255081 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | ||| || ||| || || || || || ||||||||| || || ||| Sbjct 1255082 ACCATTGAAAATGTCAAGGCTAAAATCCAGGATAAGGAAGGAATTCCTCCAGATCAGCAA 1255141 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | | || || ||||| || || | || ||||| | ||| || ||||||| ||| || Sbjct 1255142 CGTTTGATTTTTGCCGGTAAACAACTCGAGGATGGCCGCACTCTGTCCGATTATAACATC 1255201 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391 ||||| ||||| || | || ||||| | ||||||||| Sbjct 1255202 CAGAAGGAGTCAACCTTGCATCTTGTCCTTAGACTTCGA 1255240 Score = 95.1 bits (104), Expect = 3e-14 Identities = 154/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || || | || || ||||| |||||| ||||||| || || || Sbjct 1253882 CAGATCTTTGTAAAGACATTGACTGGCAAAACTATCACTCTGGAAGTCGAGCCATCCGAT 1253941 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || | || || ||||| || ||| ||||| || || || || ||||| || Sbjct 1253942 ACCATTGAGAATGTTAAAGCTAA-GATCCAAGATAAGGAGGGTATCCCACCGGATCAGCA 1254000 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 | |||| ||||| ||||| || || || || ||||| | |||||| ||||||||||| | Sbjct 1254001 ACGACTCATCTTTGCCGGTAAACAATTAGAGGATGGTCGCACTTTGTCCGATTACAACAT 1254060 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 ||| || ||||| ||||| || || ||| || | || || Sbjct 1254061 CCAAAAGGAGTCAACTCTCCATCTGGTTCTGCGTCTACG 1254099 Score = 93.3 bits (102), Expect = 1e-13 Identities = 139/196 (71%), Gaps = 1/196 (1%) Strand=Plus/Plus Query 206179 TTTTGCAAA-ACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237 ||||| ||| || | || || || || ||||| |||||||| || |||||||| | Sbjct 1254343 TTTTGTAAAGACTTTAACTGGGAAGACCATCACCTTGGAAGTCGAGCCCTCTGACACTAT 1254402 Query 206238 CGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACT 206297 ||| |||||| ||||||||||| |||||||| ||| || || ||| | | Sbjct 1254403 TGAAAATGTAAAGGCTAAGATTCAAGACAAAGAAGGCATTCCACCAGATCAGCAACGTTT 1254462 Query 206298 TATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAA 206357 || || || || || || ||||| ||||| | || || | || ||||| ||||||| Sbjct 1254463 GATTTTTGCTGGTAAACAATTGGAGGATGGGCGCACATTATCTGACTACAATATCCAGAA 1254522 Query 206358 AGAGTCTACTCTTCAC 206373 |||||| || |||||| Sbjct 1254523 AGAGTCGACCCTTCAC 1254538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181598287149095