Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_025963.1 Length=139981 Score E Sequences producing significant alignments: (Bits) Value seq49 104 2e-17 >seq49 Length=1022242 Score = 104 bits (114), Expect = 2e-17 Identities = 153/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 5400 GTTGAAGAGCACCACTCCCAGGTTCCCTCGGAAGTCCGGGTCCACGACGCCCGCTCCCAC 5459 |||||| ||||| || || | |||||| ||| | ||| |||||| ||||||||||| || Sbjct 653609 GTTGAAAAGCACTACACCTAAGTTCCCACGGTAATCCTCGTCCACAACGCCCGCTCCAAC 653550 Query 5460 ATCCACGAAGTTGTTTACCGCGAGACCGGACCTCGGCGCCACGCGACCGTAGCAGCCGTA 5519 ||| | ||| || || || || || || |||| ||| || || | ||||| | || | Sbjct 653549 ATCGATGAAATTCTTCACAGCCAGCCCAGACCGCGGGGCGACTCTTCCGTAAGAACCTTC 653490 Query 5520 TGGCGGGTGGATCTGCAGATCGGTCAGCACT-ACCGCGCGCCCCATCGGCGGCAAGGTGT 5578 || || ||||||||||||||| |||| || || |||| | | || | || | Sbjct 653489 CGGAACTTGAATCTGCAGATCGGTCTTCACTAACTGCTTTCCCC-TTGCTGGAACTGTAT 653431 Query 5579 AGTCGTAAGCGCTGTACAGGTCGTAGCCGGCCGC 5612 ||||||||||||| | |||| |||| || || Sbjct 653430 AGTCGTAAGCGCTCATTAAGTCGAAGCCTGCTGC 653397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447728942680200