Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq3563 174 2e-38 seq3509 170 2e-37 >seq3563 Length=1406 Score = 174 bits (192), Expect = 2e-38 Identities = 239/334 (72%), Gaps = 0/334 (0%) Strand=Plus/Minus Query 146840 TGAAATCGTCTATGTCCTCCACCCGCCTCAAAATCTTGAGCTTGGGGAAGGGTCGGGGGT 146899 |||| || ||||| | ||||||| ||| ||| | || || || || || | || Sbjct 405 TGAAGTCCTCTATATTCTCCACCTTCCTTTTAATGATCAGTTTCGGAAAAGGCCTCGGAA 346 Query 146900 TCCTGGCCAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCA 146959 || ||||| || || || || | ||| || || || || || || || || | Sbjct 345 CTCTTTTAAGCTGCTCTTGCAACGGTTCAATGTGATTCAGATATACATGAGCATCTCCAA 286 Query 146960 GGGTGTGCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCA 147019 ||| || ||||| || || ||||| | ||| || ||||| || |||||||| || || | Sbjct 285 AGGTATGGACAAAATCTCCAGGCTTCAAGCCTGTGACGTGAGCAACCATGTAAGTAAGAA 226 Query 147020 GCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACA 147079 | | ||||||||| ||||| || ||||||||||| |||||||| | |||||||| || | Sbjct 225 GGGCGTAGCTGGCGATGTTAAAAGGGACCCCCAGTCCCATGTCGGCAGACCTCTGATAGA 166 Query 147080 GCTGGCACGAGAGCTCCCCGTCGGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCA 147139 |||||||||| ||||| |||| || || || |||||| ||| |||||| ||||| | Sbjct 165 GCTGGCACGATAGCTCTCCGTTTGCAACATAGAACTGGACGAGGCAGTGGCAAGGCGGAA 106 Query 147140 GCGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGC 147173 | ||||| || | ||| | ||||||||||| Sbjct 105 GAGCCATCTGAGGGATGTCGACTGGGTTCCAGGC 72 >seq3509 Length=1415 Score = 170 bits (188), Expect = 2e-37 Identities = 238/334 (71%), Gaps = 0/334 (0%) Strand=Plus/Plus Query 146840 TGAAATCGTCTATGTCCTCCACCCGCCTCAAAATCTTGAGCTTGGGGAAGGGTCGGGGGT 146899 |||| || ||||| | ||||||| ||| ||| | || || || || || | || Sbjct 1011 TGAACTCCTCTATATTCTCCACCTTCCTTTTAATGATCAGTTTCGGAAAAGGCCTCGGAA 1070 Query 146900 TCCTGGCCAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCA 146959 || ||||| || || || || | ||| || || || || || || || || | Sbjct 1071 CTCTTTTAAGCTGCTCTTGCAACGGTTCAATGTGATTCAGATATACATGAGCATCTCCAA 1130 Query 146960 GGGTGTGCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCA 147019 ||| || ||||| || || ||||| | ||| || ||||| || |||||||| || || | Sbjct 1131 AGGTATGGACAAAATCTCCAGGCTTCAAGCCTGTGACGTGAGCAACCATGTAAGTAAGAA 1190 Query 147020 GCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACA 147079 | | ||||||||| ||||| || ||||||||||| |||||||| | |||||||| || | Sbjct 1191 GGGCGTAGCTGGCGATGTTAAAAGGGACCCCCAGTCCCATGTCGGCAGACCTCTGATAGA 1250 Query 147080 GCTGGCACGAGAGCTCCCCGTCGGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCA 147139 |||||||||| ||||| |||| || || || |||||| ||| ||||| ||||| | Sbjct 1251 GCTGGCACGATAGCTCTCCGTTTGCAACATAGAACTGGACGAGGCAATGGCAAGGCGGAA 1310 Query 147140 GCGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGC 147173 | ||||| || | ||| | ||||||||||| Sbjct 1311 GAGCCATCTGAGGGATGTCGACTGGGTTCCAGGC 1344 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583380820548000