Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq10 114 1e-20 seq44 84.2 2e-11 >seq10 Length=2329298 Score = 114 bits (126), Expect = 1e-20 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||||||||| || ||||| | ||||||||||| || ||| ||||| |||||| Sbjct 1252967 ATGCAAATTTTCGTGAAAACTCTTACTGGCAAGACGATCACCTTGGAAGTTGAACCCTCT 1253026 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| | ||| | |||||| |||||| |||||||| ||| | || |||||| Sbjct 1253027 GATACAATTGAGAATGTGAAAGCTAAAATTCAAGACAAAGAGGGCATTCCACCAGATCAA 1253086 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGAT--TCTAAAACTATGGGCGATTACA 106437 || | ||||| | ||| || ||||| || || ||| || | ||| | |||||||| Sbjct 1253087 CAGCGTCTTATCTTTGCTGGAAAACAGTTGGAGGATGGTCGTACACTCT--CCGATTACA 1253144 Query 106438 ACATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 | || |||||||| ||||| || ||| | || |||| || ||||||| Sbjct 1253145 ATATCCAAAAAGAGTCTACCCTTCATCTTGTGCTGAGATTGAGAGGAGG 1253193 >seq44 Length=1094211 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||||||||| || || || | || ||||||||||| || | || |||||| Sbjct 805342 ATGCAAATTTTCGTAAAGACCCTAACGGGCAAGACCATCACTCTTGAGGTCGAACCCTCT 805401 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| || ||| | || ||| ||| ||| || |||||||| | ||| |||||| Sbjct 805402 GATACTATTGAAAATGTCAAAGCAAAGATTCAAGATAAAGAAGGTATTCCCCCAGATCAA 805461 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||| | || || | ||| || |||||||| || ||| | || || ||| ||||| Sbjct 805462 CAACGTCTGATCTTTGCTGGTAAACAATTGGAGGATGGTCGTACACTGTCCGACTACAAT 805521 Query 106440 ATACAAAAAGAATCTACACTACATTTAGT 106468 || ||||| ||||| || || || || || Sbjct 805522 ATCCAAAAGGAATCAACCCTCCACTTGGT 805550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402257544654560