Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq10 123 2e-23 seq39 86.0 6e-12 >seq10 Length=2329298 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 |||||||||||| | || || | ||| | || ||||||||| ||||||||||||| Sbjct 1253879 TTCCACCACGTAGACGCAGAACTAGATGAAGTGTTGACTCCTTTTGGATGTTGTAATCGG 1253820 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 ||| || || | || |||| ||||||||| ||||| ||||| || ||||| || | | Sbjct 1253819 ACAAAGTGCGACCATCTTCCAACTGCTTACCGGCAAAGATCAATCGTTGCTGATCTGGTG 1253760 Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCA 35687 ||| | || |||||| ||| || ||| | | | | | ||| || | ||| | Sbjct 1253759 GAATACCTTCTTTGTCCTGGATTTTAGCCTTAACATTCTCGATCGTATCTGATGGTTCAA 1253700 Query 35688 CCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 |||||| || || || ||||| |||||||| || || || |||||||||| Sbjct 1253699 CCTCCAATGTAATTGTCTTACCGGTCAAAGTCTTAACGAAAATCTGCATTC 1253649 Score = 123 bits (136), Expect = 2e-23 Identities = 169/236 (72%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 35503 TTTATTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTA 35562 || ||||||||| || | || | || | ||| || || |||||| || ||||| || Sbjct 1255252 TTAATTTCCACCTCGAAGTCTAAGGACAAGATGCAAGGTTGACTCCTTCTGGATGTTATA 1255193 Query 35563 ATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTC 35622 ||||| || || || | || || || || ||||| ||||| ||||| || ||||| || Sbjct 1255192 ATCGGACAGAGTGCGGCCATCCTCGAGTTGTTTACCGGCAAAAATCAAACGTTGCTGATC 1255133 Query 35623 CGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGA 35682 | ||||| | ||||| ||| ||| || ||| | | || | | || || | Sbjct 1255132 TGGAGGAATTCCTTCCTTATCCTGGATTTTAGCCTTGACATTTTCAATGGTATCAGAAGG 1255073 Query 35683 TTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 ||| || |||| |||||||||||||||||||| || |||||||| |||||||||| Sbjct 1255072 TTCAACTTCCAAAGTGATCGTTTTACCCGTCAAGGTCTTCACAAAAATCTGCATTC 1255017 Score = 102 bits (112), Expect = 7e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 |||||||||||| | || |||| ||| | || ||||||||| ||||||||||||| Sbjct 1254107 TTCCACCACGTAGACGCAGAACCAGATGGAGAGTTGACTCCTTTTGGATGTTGTAATCGG 1254048 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 ||| || || | || || | || ||||| ||||| || | || ||||| |||| | Sbjct 1254047 ACAAAGTGCGACCATCCTCTAATTGTTTACCGGCAAAGATGAGTCGTTGCTGATCCGGTG 1253988 Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCA 35687 | | | |||||| || |||||| || | | | | | || ||| | || | Sbjct 1253987 GGATACCCTCCTTATCTTGGATCTTAGCTTTAACATTCTCAATGGTATCGGATGGCTCGA 1253928 Query 35688 CCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 | |||| ||||| ||||| || ||||| || || ||||| |||||||||| Sbjct 1253927 CTTCCAGAGTGATAGTTTTGCCAGTCAATGTCTTTACAAAGATCTGCATTC 1253877 Score = 100 bits (110), Expect = 3e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 |||||||||| || ||||||||||||||| ||||| | || || || | || || Sbjct 1252947 ACCAAATGTAGGGTCGACTCCTTTTGAATGTTATAATCAGACAGCGTGCGACCATCTTCT 1252888 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 ||||| || || ||||| ||||| | |||||||| | ||||| | ||| || ||| Sbjct 1252887 AGCTGTTTGCCAGCAAAGATCAATCTTTGCTGGTCTGGAGGAATTCCCTCTTTATCCTGA 1252828 Query 35648 ATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTA 35707 ||||| ||| | || | | || || | || || |||| ||||| ||||| Sbjct 1252827 ATCTTAGCCTTAACGTTTTCAATGGTATCAGAAGGCTCAACTTCCAAGGTGATAGTTTTG 1252768 Query 35708 CCCGTCAAAGTTTTCACAAATATCTGCATTCTGTG 35742 || || | || |||||||| ||||||||| |||| Sbjct 1252767 CCTGTTAGTGTCTTCACAAAGATCTGCATTTTGTG 1252733 Score = 100 bits (110), Expect = 3e-16 Identities = 151/212 (71%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 ||||| || | ||| ||||||||||| |||||||| | | || || | || ||| Sbjct 1254315 ACCAAGTGGAGAGTAGATTCCTTTTGAATATTGTAATCAGAAAGTGTGCGTCCATCTTCC 1254256 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 | ||||| || ||||| || | || ||||| || | |||| | ||||| ||| || Sbjct 1254255 AATTGCTTTCCAGCAAAGATAAGACGTTGCTGATCTGGGGGAATTCCTTCCTTATCC-TG 1254197 Query 35648 ATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706 | ||| || || | | || | | || ||| | ||| || |||| || |||||||| Sbjct 1254196 AATTTTAGCCTTAACATTTTCGATGGTATCGGATGGTTCGACTTCCAATGTTATCGTTTT 1254137 Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 ||| |||||||||||||| || |||||||||| Sbjct 1254136 ACCAGTCAAAGTTTTCACGAAGATCTGCATTC 1254105 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| ||||| || ||||| | ||||| || | || |||| || || || ||||| Sbjct 1253614 CTCCTTCTGAATATTATAATCAGATAAGGTACGGCCATCCTCCAATTGTTTCCCAGCAAA 1253555 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || ||||| || | ||||| | ||||| || |||||| ||||| | | Sbjct 1253554 GATGAGTCGTTGCTGATCTGGAGGAATTCCTTCCTTATCTTGAATCTTTGCCTTCACATT 1253495 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | ||||| | ||| || |||| ||||||||||| || || | ||||||||| Sbjct 1253494 TTCAATAGTGTCAGAAGGTTCAACTTCCAATGTGATCGTTTTGCCAGTAAGAGTTTTCAC 1253435 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 1253434 GAAAATCTGCAT 1253423 >seq39 Length=1160777 Score = 86.0 bits (94), Expect = 6e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 |||||| || | ||| |||||| || ||||||||||||| | || || | || || Sbjct 535132 CACCAAGTGCAGGGTAGACTCCTTCTGGATGTTGTAATCGGAAAGTGTGCGACCATCCTC 535073 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 ||||| ||||| || || |||| ||||| || || | || | | |||||||||| Sbjct 535072 AAGCTGTTTACCGGCGAAAATCAGACGCTGTTGATCTGGGGGGATTCCCTCCTTGTCCTG 535013 Query 35647 GATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706 |||||| || | | || | | ||||| | || ||||| | ||||| || || Sbjct 535012 GATCTTCGCTTTGACATTTTCAATAGTGTCTGAGGGCTCGACCTCAAGAGTGATGGTCTT 534953 Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||| || | ||||| || || |||||||| Sbjct 534952 ACCGGTTAGGGTTTTTACGAAGATCTGCAT 534923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450710794850600