Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq13 609 3e-169 seq170 98.7 1e-15 >seq13 Length=2077869 Score = 609 bits (674), Expect = 3e-169 Identities = 1266/1871 (68%), Gaps = 28/1871 (1%) Strand=Plus/Minus Query 68364 CTTATCCAATGTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATACC 68423 |||||| | ||||| ||||| ||| | ||| || ||||| || |||||||||||||| Sbjct 1821406 CTTATCAACAGTAAATTGAATTGGTTGTGCTGCTGGCTTTGTTCGGAGATAGTACATACC 1821347 Query 68424 GGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGG 68483 || ||||| || || |||| || || || || || | ||||| |||| | || Sbjct 1821346 CGTCTTCAGGCCCAGCTTCCAGCCATAAAAGTGGATCTTCGTTAGCAGTCCATAATTGGG 1821287 Query 68484 ATCGGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGC 68543 || || | |||||||| | ||||||||||||||| ||||| || || | ||||| || Sbjct 1821286 CTCTGCAACGTGAATATTGAACGATTGACTTTGATCAATGAAGGCACCACGGTCTGCAGC 1821227 Query 68544 CATTTTTATAATACTCTTTTGA--GGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATA 68601 ||| | || | | |||| | | ||||||||||| |||||| | ||| ||| Sbjct 1821226 CATGTGCAT--TTGTGTTTTAACCGAAATTTCCCAAACGGTCTTATAGATCATCCGAATA 1821169 Query 68602 TCATCTGGAAGGCTCG-TATTT--TGAATGGATCCACCATCGGATATAATTATATTCTTG 68658 | || || | || ||| | |||| ||| || | || || |||||| ||||| Sbjct 1821168 TTCTCCGGGATCTTCTCTATGTCCTGAACGGAACCTCTATTGGCTATAATAGCGTTCTTC 1821109 Query 68659 ATCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTAACTATT 68718 || || || | ||| | | || ||||| | | ||||| | || || | | Sbjct 1821108 ATATCTTCGTCCCAAAGATCCAGTTCGGTTAAGTCGGCCAAAAGATGGTGGTTTACGACT 1821049 Query 68719 TGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 68778 |||||| || || | ||| | |||| |||||| || ||| || || || | || Sbjct 1821048 ATAAATTCACCCGAAAGCACACGACGATGGTAAATGTTCGAGGTGTAGGGCTCAAAGGAC 1820989 Query 68779 TCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTA 68838 ||||| || || |||||||| | ||| ||||| || ||||| || |||| || || | Sbjct 1820988 TCATTGTTGCCAAGAATTTGTGAAGTAGATGCTGTGGGCATCGGCGCCAATAACAAGGAA 1820929 Query 68839 TTTCTAAGACCATG-TGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGATCAGA 68897 || |||| |||| || | | ||||| || || || | ||| ||||| | || | Sbjct 1820928 TTCCTAACGCCATACTGCTTT-ATTTTCTCCTTAAGCTCCGCCCAGTCCCATAAATTGGT 1820870 Query 68898 TGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCATTATA 68957 || | ||| | |||||| || || ||||| || || | ||||| | || Sbjct 1820869 GGGCGTTTTGTCCCACATATCGTACTGGAGTATTCCTTTGCTGACCGGCGATCCCTCGTA 1820810 Query 68958 TGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAATA 69017 ||||| || ||||| | || ||||||||| || || || || | || ||||| || Sbjct 1820809 GGTTTCGTACGGTCCAAATTCTTTAGCTAGTTCGCAGCTGGCTTCAAGGGCTCCGTAGTA 1820750 Query 69018 AATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGGATAATG 69077 ||| ||||| ||||||| || ||| | | ||| || || || ||| | || ||| | Sbjct 1820749 AATAGTTTCAAAAATCTGCTGATTCAATTTTTGAGCCTCCTCGCTTTCGTAGGGGTAACG 1820690 Query 69078 TAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTCTT 69137 | ||||| |||| ||| |||| || || || || || || || || | || || | Sbjct 1820689 CATCAGAATGAATGTATCAGCCATGCCTTGCACACCTATGCCAATCGGGCGGTGCTTCAT 1820630 Query 69138 ATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGATT 69197 || || | | ||||||||| || ||||| || |||||||| ||||| || || ||||| Sbjct 1820629 GTTGGACTTCTTAGCTTCTGGCATCGGATAGTAGTTAATATCGATAATCTTGTTTAGATT 1820570 Query 69198 TCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAA----TCGTCCATCTA 69253 | ||| |||| || |||| | ||| | || ||| | | ||| | Sbjct 1820569 CCTCGTCACTGTTTTAGTAACTGCCTTCAATTTCTGGAAGTCATACTTCTTTTCCGGCG- 1820511 Query 69254 TAACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGAATTTG 69313 | || ||||| |||| || | ||| || | |||||| || |||| || | | | Sbjct 1820510 TGACGAACATGTTCAACGCAATAGAGGCCAAATTACATACGGCTATTTCGTCGGCGGCCG 1820451 Query 69314 CATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGAT 69373 || | || || ||||| |||||||| |||||||| |||||||| | ||| ||||| | Sbjct 1820450 AGTACTCTACAATTTCTGTGCATAGATTGCTACATTTAATAGTCCCGATATTCTGCTGGT 1820391 Query 69374 TACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAATCTGAG 69433 |||||||| |||| || ||||||||||| | ||| | ||||| || || || | ||||| Sbjct 1820390 TACTCTTTCTGTTGCATGCGTCCTTGTATAACATATAAGGAGTTCCTGTCTCTACCTGAG 1820331 Query 69434 ATTCGATAATAGATTTCCAAACGACCCTAGCATTTA--TTACGGTCTTGTAACGCTTCTC 69491 |||| || |||| ||| | ||| || || | || | || || |||| ||| Sbjct 1820330 ATTCAATTATAGCAAACCACAGCTGCCTGGCCTTCACCTTCCTGT--TGGCACGCCCCTC 1820273 Query 69492 TTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGG 69551 || || |||| ||| |||||| |||||||| ||| ||||| || ||| | |||| Sbjct 1820272 GTTCTCGTATTTTGTGTATAGCTCTTCGAATTTATCACCCCACACCTCAAAGAGGTCAGG 1820213 Query 69552 ACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAG 69611 ||||| ||||||||||||||| ||||| | ||||| ||| || | |||||||| || Sbjct 1820212 ACATTTATTTGGACACATCAAAGACCAGTCTTCATCTGCCTCGACCCTCTTCATAAAGAG 1820153 Query 69612 ATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAtt 69671 ||| |||||||| || || ||| | || | | | | ||||| || || || Sbjct 1820152 ATCCGGAATCCAGAGTGCGTAAAATAAGTCGCGAGCACGGTGCTCTTCTGCGCCAGTGTT 1820093 Query 69672 ttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCAT 69731 || || || | |||||||| | | ||| | |||||| || || | || || || | Sbjct 1820092 CTTCTTCAGGTTCAGAAACTCAAAGACATCTGCATGCCAGGGCTCCAAGTAAATAGCGAA 1820033 Query 69732 GACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCT 69791 | | || || ||||||||||||||||| || | || | ||| ||| ||| | || || Sbjct 1820032 GGCCCCGGGACGTTTATTTCCTCCCTGGTCAACATACTTTGCAACGTTGTTAAACACCCT 1819973 Query 69792 CAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGC 69851 || ||| |||| | |||||||||| | |||||||| |||| ||| | |||| | || Sbjct 1819972 CAACATGGGAACGAGACCATTAGATATGCCATTTGTGCCAGCTATAGCAGTTCCCTTCGC 1819913 Query 69852 GCGAATATTACTAATAGA----TAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCAC 69907 || ||| ||| || || || ||||||||||| | || ||||| | ||| | Sbjct 1819912 TCGGATAC----AATGGACGTTTAAGCCGATTCCTCCTGCGTTCTTCGAGATCATAGCGC 1819857 Query 69908 AACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAAC 69967 | || | || | | | || ||||| || ||| || | |||| | | ||||||| Sbjct 1819856 AGCGCTCCACAGACTTGAAGATTCCCTCAATTGAATCCTCGACCATGGTCAATAGAAAAC 1819797 Query 69968 AGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGA 70027 | || | ||| || | || | || || ||||| || ||||| ||||||| Sbjct 1819796 ACGAGGAGAGTTGTGGACGACGTGTCGCAGCTGCGAACAATGTTGGGGATGCATGAGTGA 1819737 Query 70028 ACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATCC-CACTGATGA 70086 | ||||||| ||||| || ||||| ||||| || || | || ||||| ||| | ||| Sbjct 1819736 AATATTTTTCCGAAAGGAGGTTGTACGTTTCGATTGCGGCATCGATATCTTCACCG-TGA 1819678 Query 70087 ATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATT 70146 ||||| | | || | ||||||||| |||||||||||||| | ||||| ||| ||| Sbjct 1819677 ATTCCGACTGAAACTCTCATCAACATGTGCTGAGGTCGTTCGGCGATTTTACCATTGATT 1819618 Query 70147 TTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTT 70206 || || || || || |||| ||||||||||| || || |||||||| ||||| | Sbjct 1819617 TTTAAAAGATAGGACCTTTCGAGAGTTTTAAAGCCGAAGTAGTTGTAATTGAAGTCGCGG 1819558 Query 70207 TCGTAAATAAT 70217 ||||||||||| Sbjct 1819557 TCGTAAATAAT 1819547 >seq170 Length=322284 Score = 98.7 bits (108), Expect = 1e-15 Identities = 185/272 (68%), Gaps = 0/272 (0%) Strand=Plus/Minus Query 39877 ATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAATGGATGTTTTCAATCGC 39936 ||| |||| ||| || || ||||| | ||| |||||||| || |||| ||||| || || Sbjct 23919 ATCCTTAATATAAGTGTCGATTAAAATACTGTACATTTCCGAGTGGACATTTTCTATGGC 23860 Query 39937 CATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTCTGAACAAAATCTTTC 39996 || || || ||||| ||| | | ||||| | ||||| ||||| | || | || Sbjct 23859 AATTTGGAAGCCGTAGAAAAAGCGAGCTTCCGGGATTTGCACCTCCTGGCTGAAACGCTC 23800 Query 39997 CGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCCAATACATGTTTAAT 40056 | | | ||||||||| || ||||| || || || || || || | || ||| ||| Sbjct 23799 CACGAGATTTTCATTTACAATTCCGTCGGAGGCAGCGAAGAAAGCTAGCACGTGTGAAAT 23740 Query 40057 AAAATATTTTTCATCGGGTGTCAATTTATTCCAGTCATTGATATCTTTTGATATATCTAC 40116 || | || ||| ||| || | ||| | ||| | | | || || || | | ||| Sbjct 23739 GAAGTGCTTCTCACCGGCTGATAGTTTCTCCCAATGCTGTAAGTCATTCGAAAGGTTTAC 23680 Query 40117 TTCTTCAGCTGTCCAAAACGACGCCTCTGCCT 40148 ||| || ||||||||||||| || || |||| Sbjct 23679 TTCCTCCACTGTCCAAAACGAGGCTTCAGCCT 23648 Score = 84.2 bits (92), Expect = 3e-11 Identities = 76/96 (79%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 39313 CATAACTCCCATTTTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTC 39372 |||||| |||||||||||||| || || || ||||||||| || || || || || || Sbjct 24601 CATAACACCCATTTTTTGGTACTCGCCCACCTTTTTCTCGAAGAAGTTCGTCTTACCATC 24542 Query 39373 CAATGATATATTTTCCATGAAATCAAACGGATTAGT 39408 | ||| || |||||||||||||||| ||||| || Sbjct 24541 AAGTGAGATTATTTCCATGAAATCAAAAGGATTTGT 24506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686782623439800