Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq10 116 3e-21 seq39 111 1e-19 seq44 100 2e-16 >seq10 Length=2329298 Score = 116 bits (128), Expect = 3e-21 Identities = 166/234 (71%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 |||||||| | || | || ||||||| || || || || ||||| || |||||| Sbjct 1253421 CCTCCGCGAAGACGTAGAACTAAATGTAGAGTGGATTCCTTCTGAATGTTATAGTCGGAG 1253362 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | || | || || ||||||||||| || |||| | |||||||||||| || || Sbjct 1253361 AGAGTACGACCATCCTCAAGCTGTTTACCAGCAAAAATCAAACGCTGTTGATCTGGAGGA 1253302 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||| |||||||| ||| ||| ||||| |||| | || || | | |||||| Sbjct 1253301 ATACCTTCTTTATCTTGGATTTTGGCTTTCACATTTTCAATTGTATCAGAAGGCTCAACT 1253242 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGCT 27254 |||| || || | ||| || ||||| ||||| ||||| || |||||| || || Sbjct 1253241 TCTAATGTAATTGTTTTCCCAGTCAGTGTTTTTACAAAAATCTGCATACCTCCT 1253188 Score = 107 bits (118), Expect = 2e-18 Identities = 152/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 27038 TACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTC 27097 ||||||||| | || || || || || || || |||||| || |||| ||||||| Sbjct 1255000 TACCAAATGGAGAGTGGATTCCTTCTGGATGTTATAGTCGGACAAAGTGCGACCGTCTTC 1254941 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 | || ||||| || | || ||||| |||||||| || || | || ||||| || Sbjct 1254940 CAATTGCTTACCAGCAAAGATAAGACGTTGTTGATCTGGAGGAATCCCTTCTTTGTCCTG 1254881 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217 |||||| || | | | || | ||||||| | |||||| || | ||| |||| ||| Sbjct 1254880 AATCTTGGCCTTAACGTTCTCAATTGTGTCTGACGGTTCAACCTCCAAAGTGATAGTTTT 1254821 Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCATAGCT 27251 ||| || | ||| ||||| |||||||||||| || Sbjct 1254820 GCCGGTTAAAGTCTTCACGAAGATTTGCATACCT 1254787 Score = 104 bits (114), Expect = 2e-17 Identities = 154/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 |||| |||| ||| | || || || ||||| || ||||| ||| || |||| | Sbjct 1254093 CGCAGAACCAGATGGAGAGTTGACTCCTTTTGGATGTTGTAATCGGACAAAGTGCGACCA 1254034 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 || || | ||||||||||| | ||||| || || |||||||| || | |||||| ||| Sbjct 1254033 TCCTCTAATTGTTTACCGGCAAAGATGAGTCGTTGCTGATCCGGTGGGATACCCTCCTTA 1253974 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTG-TGGCTTCAACTTCTAGAGTTAT 27211 || |||||| ||| | | || | || || | |||| || ||||| ||||| || Sbjct 1253973 TCTTGGATCTTAGCTTTAACATTCTCAATGGTATCGGATGGC-TCGACTTCCAGAGTGAT 1253915 Query 27212 AGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || |||||| |||| || || |||||||| ||||| Sbjct 1253914 AGTTTTGCCAGTCAATGTCTTTACAAAGATCTGCAT 1253879 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 ||||| | ||| | || || | ||| | ||||| |||||||| |||||||| ||| Sbjct 1253193 CCTCCTCTCAATCTCAGCACAAGATGAAGGGTAGACTCTTTTTGGATATTGTAATCGGAG 1253134 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | || | || || | |||||| || || | || |||||||||||||| || || Sbjct 1253133 AGTGTACGACCATCCTCCAACTGTTTTCCAGCAAAGATAAGACGCTGTTGATCTGGTGGA 1253074 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | |||||||| || || || ||||| | || | || || | || ||||||| Sbjct 1253073 ATGCCCTCTTTGTCTTGAATTTTAGCTTTCACATTCTCAATTGTATCAGAGGGTTCAACT 1253014 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || | || || | ||||| || ||||||||||| || |||||||| Sbjct 1253013 TCCAAGGTGATCGTCTTGCCAGTAAGAGTTTTCACGAAAATTTGCAT 1252967 Score = 87.8 bits (96), Expect = 2e-12 Identities = 160/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCT 27079 ||||| |||| || | ||||| || | || || ||||| || ||||||||||| | | Sbjct 1254561 CCTCCTCGCAGGCGAAGCACCAAGTGAAGGGTCGACTCTTTCTGGATATTGTAGTCAGAT 1254502 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 ||| ||||| | || || | |||||||| || |||| | ||| || ||||| || || Sbjct 1254501 AATG-TGCGCCCATCCTCCAATTGTTTACCAGCAAAAATCAAACGTTGCTGATCTGGTGG 1254443 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | || ||||| || ||||| || | |||| | |||||| | || || || Sbjct 1254442 AATGCCTTCTTTGTCTTGAATCTTAGCCTTTACATTTTCAATAGTGTCAGAGGGCTCGAC 1254383 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCT 27251 ||| | || || | || || || | ||| || ||||| ||||||||| || Sbjct 1254382 TTCCAAGGTGATGGTCTTCCCAGTTAAAGTCTTTACAAAAATTTGCATACCT 1254331 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 ||||| || | || | |||||||||| || || || |||||||| || || || | Sbjct 1252965 CCTCCACGAAGACGAAGGACCAAATGTAGGGTCGACTCCTTTTGAATGTTATAATCAGAC 1252906 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | |||| | ||||| |||||||| || || | || | | || || || || || Sbjct 1252905 AGCGTGCGACCATCTTCTAGCTGTTTGCCAGCAAAGATCAATCTTTGCTGGTCTGGAGGA 1252846 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||||||||| ||||| || | | |||| | || || | | |||||| Sbjct 1252845 ATTCCCTCTTTATCCTGAATCTTAGCCTTAACGTTTTCAATGGTATCAGAAGGCTCAACT 1252786 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || | || |||| |||||| || || || ||||||||||| ||||| Sbjct 1252785 TCCAAGGTGATAGTTTTGCCTGTTAGTGTCTTCACAAAGATCTGCAT 1252739 >seq39 Length=1160777 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | ||||| || || || || ||||| ||| | |||| | || || Sbjct 535131 ACCAAGTGCAGGGTAGACTCCTTCTGGATGTTGTAATCGGAAAGTGTGCGACCATCCTCA 535072 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||||||||||||| |||| |||||||||||||| || || | ||||| || || | Sbjct 535071 AGCTGTTTACCGGCGAAAATCAGACGCTGTTGATCTGGGGGGATTCCCTCCTTGTCCTGG 535012 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| ||| | |||| | |||||||| || || || || ||||| || | || Sbjct 535011 ATCTTCGCTTTGACATTTTCAATAGTGTCTGAGGGCTCGACCTCAAGAGTGATGGTCTTA 534952 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || ||||| || ||||| ||||| Sbjct 534951 CCGGTTAGGGTTTTTACGAAGATCTGCAT 534923 >seq44 Length=1094211 Score = 100 bits (110), Expect = 2e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | || || || ||||| |||||||||||| || | || | || || Sbjct 805550 ACCAAGTGGAGGGTTGATTCCTTTTGGATATTGTAGTCGGACAGTGTACGACCATCCTCC 805491 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 | |||||||| || | || ||||| |||||||| || || | ||| |||||||| Sbjct 805490 AATTGTTTACCAGCAAAGATCAGACGTTGTTGATCTGGGGGAATACCTTCTTTATCTTGA 805431 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| ||| | |||| | ||| || | || ||| || || ||||| || | ||| Sbjct 805430 ATCTTTGCTTTGACATTTTCAATAGTATCAGAGGGTTCGACCTCAAGAGTGATGGTCTTG 805371 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGC 27253 ||||| || || || || || |||||||| | ||| Sbjct 805370 CCCGTTAGGGTCTTTACGAAAATTTGCATGGTTGC 805336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424858296240840