Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq13 165 1e-35 >seq13 Length=2077869 Score = 165 bits (182), Expect = 1e-35 Identities = 926/1463 (63%), Gaps = 52/1463 (4%) Strand=Plus/Minus Query 117830 CTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCAT 117889 ||||| |||||| |||||||| |||||||| || ||| |||||||| |||| | || || Sbjct 1821370 CTTTGTTCGGAGATAGTACATACCCGTCTTCAGGCCCAGCTTCCAGCCATAAAAGTGGAT 1821311 Query 117890 TGAGGACAACTTGGAGAGGGTTGGACTTTCCA---TGAAGAGGTTCATACTTTGGGATTG 117946 | | | | | |||| || | || |||| | || | ||| ||| Sbjct 1821310 CTTCGTTAGCA-GTCCATAATTGGGCTCTGCAACGTGAATA--TTGAACGATTGACTTTG 1821254 Query 117947 ATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCA 118006 ||| |||||| || || || || ||||| | || || | | |||||||| Sbjct 1821253 ATCAATGAAGGCACCACGGTCTGCAGCCATGTGCATTTGTGTTTTAACCGAAATTTCCCA 1821194 Query 118007 CACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCC 118066 || ||| | |||| || ||||| || ||||| | | | || | || | ||| || Sbjct 1821193 AACGGTCTTATAGATCATCCGAATATTCTCCGGGATCTTCTCTATGTCCTGAACGGAACC 1821134 Query 118067 ACCCGCCTTGACCATGAGATC---CTTCATATCCTTTGACCAGAGA-CCAATCTTTTTGA 118122 | ||| | || | | | ||||||||| | ||| ||| ||| | || | Sbjct 1821133 TCTA---TTGGCTATAATAGCGTTCTTCATATCTTCGTCCCAAAGATCCAGTTCGGTTAA 1821077 Query 118123 GATCCTCCACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGAT 118182 | || ||| ||||| | || || || | ||| ||||||| || || | | | Sbjct 1821076 G-TCGGCCAAAAGATGGTGGTTTACGACTATAAATTCACCCGAAAGCACACGACGATGGT 1821018 Query 118183 AGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGG 118242 | || || | ||||| ||||||||| |||||||||| || | ||||| | || || | Sbjct 1821017 AAATGTTCGAGGTGTAGGGCTCAAAGGACTCATTGTTGCCAAGAATTTGTGAAGTAGATG 1820958 Query 118243 CTGTGGGCATGGGTGCCA-TGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 118301 |||||||||| || |||| | | |||| || | | || | | | | || ||| Sbjct 1820957 CTGTGGGCATCGGCGCCAATAACAAGGAA-TTCCTAACGCCATACTGCTTTATTTTCTCC 1820899 Query 118302 TTGAGAGCGTCCCAGTCGTA------GTTGAGCTTTGTCTCCCCCTGCCACATATCAAAC 118355 || || | ||||||| | | || || || | |||| ||||||| || Sbjct 1820898 TTAAGCTCCGCCCAGTCCCATAAATTGGTGGGCGTTTTGTCCC------ACATATCGTAC 1820845 Query 118356 TGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCC 118415 ||||| || |||| | | ||||||||||| | || || || || || | | Sbjct 1820844 TGGAGTATTCCTTTGCTGACCGGCGATCCCTCGTAGGTTTCGTACGGTCCAAATTCTTTA 1820785 Query 118416 GCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTC 118475 || | |||| |||| || || |||||| ||| || || ||||||||||| | |||| Sbjct 1820784 GCTAGTTCGCAGCTGGCTTCAAGGGCTCCGTAGTAAATAGTTTCAAAAATCTGCTGATTC 1820725 Query 118476 ATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGA 118535 | | | ||||| ||| || | | | || || ||| ||| ||| || | Sbjct 1820724 AATTTTTGAGCCTCCTCGCTTTCGTAGGGGTAACGCATCAGAATGAATGTATCAGCCATG 1820665 Query 118536 CCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCT-CCAC 118594 ||||| ||||| | |||||| ||||| || |||| || |||||| ||| ||| || Sbjct 1820664 CCTTGCACACCTATGCCAATCGGGCGGTGCTTCATGTTGGACTTCTTAGC-TTCTGGCAT 1820606 Query 118595 GGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTC 118654 ||||| | || ||||||||| | | |||||||| | || || || || | | | Sbjct 1820605 CGGATAGTAGTTAATATCGATAATCTTGTTTAGATTCCTCGTCACTGTTTTAGTAACTGC 1820546 Query 118655 ATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTC---ATTGACATACTTAGGAAGGGC 118711 | | || | | | || | ||| ||| ||| |||| || | | || Sbjct 1820545 CTTCAATTTCTGGAAGTC-ATACT-----TCTTTTCCGGCGTGACGAACATGTTCAACGC 1820492 Query 118712 GATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGT 118771 || || |||| |||||| || | | || || | | |||||||| |||||| || Sbjct 1820491 AATAGAGGCCAAATTACATACGGCTATTTCGTCGGCGGCCGAGTACTCTACAATTTCTGT 1820432 Query 118772 GCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGC 118831 ||| | || || ||||| || || | |||| || || |||| |||| || || Sbjct 1820431 GCATAGATTGCTACATTTAATAGTCCCGATATTCTGCTGGTTACTCTTTCTGTTGCATGC 1820372 Query 118832 ATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCA 118891 |||||||| | ||| || || || || ||||| || || | | ||||| || Sbjct 1820371 GTCCTTGTATAACATATAAGGAGTTCCTGTCTCTACCTGAGATTCAATTATAGCAAACC- 1820313 Query 118892 GACATCGGCAGCTGG----CACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGT 118947 ||| | || |||| ||| | |||||| |||||||| | |||||| ||||||| Sbjct 1820312 -ACAGCTGC--CTGGCCTTCACCTTCCTGTTGGCACGCCCCTCGTTCTCGTATTTTGTGT 1820256 Query 118948 AGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGA 119007 | || |||| || | |||||| |||| |||| | || |||| ||| || | Sbjct 1820255 ATAGCTCTTCGAATTTATCACCCCACACCTCAAAGAGGTCAGGACATTTATTTGGACACA 1820196 Query 119008 AGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCG 119067 | |||||| | || | |||| |||| |||||| ||||| || || |||||||| | Sbjct 1820195 TCAAAGACCAGTCTTCATCTGCCTCGACCCTCTTCATAAAGAGATCCGGAATCCAGAGTG 1820136 Query 119068 CCGAGAAGAGATCCCGA-CAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAA 119126 | | || | || ||| || | || ||||| | || || || | || | Sbjct 1820135 CGTAAAATAAGTCGCGAGCACGGTGC-TCTTCTGCGCCAGTGTTCTTCTTCAGGTTCAGA 1820077 Query 119127 AAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---A 119183 || || | || ||| || ||||| || |||| ||| | |||| | ||| ||| | Sbjct 1820076 AACTCAAAGACATCTGCATGCCAGGGCTCCAAGTAAATAGCGAAGGCCCCGGGACGTTTA 1820017 Query 119184 CGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATA 119243 || |||||| |||||| | ||| | |||||| || | | ||| |||| || | Sbjct 1820016 TTTCCTCCCTGGTCAACATACTTTGCAACGTTGTTAAACACCCTCAACATGGGAACGAGA 1819957 Query 119244 CCATCGGATTGGCCATTTGTCCC 119266 |||| ||| ||||||||| || Sbjct 1819956 CCATTAGATATGCCATTTGTGCC 1819934 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618321601184200