Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq3563 215 4e-51 seq3509 210 2e-49 seq650 98.7 8e-16 >seq3563 Length=1406 Score = 215 bits (238), Expect = 4e-51 Identities = 274/367 (75%), Gaps = 10/367 (3%) Strand=Plus/Minus Query 29798 AAGTCGTCCAGGCTCTCCACCCTCCTGTTTATCCTCAGTGTGGGAAAGGGTCTGGGCTCC 29857 ||||| || | |||||||| |||| || || ||||| | ||||| || || || | Sbjct 403 AAGTCCTCTATATTCTCCACCTTCCTTTTAATGATCAGTTTCGGAAAAGGCCTCGGAACT 344 Query 29858 CTCTCGAGCTGAGTCTT-CAGCGGTTCCACGTTATCCAGGTAGACGTGAGCGTCTCCCAG 29916 || | ||||| |||| || |||||| | || || ||| || || ||||| ||||| | Sbjct 343 CTTTTAAGCTGC-TCTTGCAACGGTTCAATGTGATTCAGATATACATGAGCATCTCCAAA 285 Query 29917 GTTGTGGACAAACTCTCCCGG-TTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGA 29975 | | |||||||| ||||| || ||| |||| | |||||||||| | |||||| || || | Sbjct 284 GGTATGGACAAAATCTCCAGGCTTCAAGCCTG-TGACGTGAGCAACCATGTAAGTAAGAA 226 Query 29976 GAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGA 30035 | | |||||||||||||||||| || ||||| || |||||||| | |||||||| |||| Sbjct 225 GGGCGTAGCTGGCGATGTTAAAAGGGACCCCCAGTCCCATGTCGGCAGACCTCTGATAGA 166 Query 30036 GCTGACACGAGAGCTCTCCGTCGCTCACGTAAAACTGACACATGGC-GTGGCACGGAGGA 30094 |||| ||||| |||||||||| || || ||||| || ||| |||||| || ||| Sbjct 165 GCTGGCACGATAGCTCTCCGTTTGCAACATAGAACTGG-ACGAGGCAGTGGCAAGGCGGA 107 Query 30095 AGAGCCA--TGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTT 30152 ||||||| ||||| | ||| |||||||||||| || |||||| || | ||| | Sbjct 106 AGAGCCATCTGAGG--GATGTCGACTGGGTTCCAGGCGGTCATGATGATTCGGCGGTCGT 49 Query 30153 CTGGGTT 30159 ||||| Sbjct 48 TAGGGTT 42 >seq3509 Length=1415 Score = 210 bits (232), Expect = 2e-49 Identities = 265/354 (75%), Gaps = 10/354 (3%) Strand=Plus/Plus Query 29811 TCTCCACCCTCCTGTTTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAG 29870 |||||||| |||| || || ||||| | ||||| || || || | || | ||||| Sbjct 1026 TCTCCACCTTCCTTTTAATGATCAGTTTCGGAAAAGGCCTCGGAACTCTTTTAAGCTGC- 1084 Query 29871 TCTT-CAGCGGTTCCACGTTATCCAGGTAGACGTGAGCGTCTCCCAGGTTGTGGACAAAC 29929 |||| || |||||| | || || ||| || || ||||| ||||| | | | |||||||| Sbjct 1085 TCTTGCAACGGTTCAATGTGATTCAGATATACATGAGCATCTCCAAAGGTATGGACAAAA 1144 Query 29930 TCTCCCGG-TTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGC 29988 ||||| || ||| |||| | |||||||||| | |||||| || || || | ||||||||| Sbjct 1145 TCTCCAGGCTTCAAGCCTG-TGACGTGAGCAACCATGTAAGTAAGAAGGGCGTAGCTGGC 1203 Query 29989 GATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAG 30048 ||||||||| || ||||| || |||||||| | |||||||| |||||||| ||||| || Sbjct 1204 GATGTTAAAAGGGACCCCCAGTCCCATGTCGGCAGACCTCTGATAGAGCTGGCACGATAG 1263 Query 30049 CTCTCCGTCGCTCACGTAAAACTGACACATGGC-GTGGCACGGAGGAAGAGCCA--TGAG 30105 |||||||| || || ||||| || ||| ||||| || |||||||||| |||| Sbjct 1264 CTCTCCGTTTGCAACATAGAACTG-GACGAGGCAATGGCAAGGCGGAAGAGCCATCTGAG 1322 Query 30106 GCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTT 30159 | | ||| |||||||||||| || |||||| || | ||| | ||||| Sbjct 1323 G--GATGTCGACTGGGTTCCAGGCGGTCATGATGATTCGGCGGTCGTTAGGGTT 1374 >seq650 Length=6480 Score = 98.7 bits (108), Expect = 8e-16 Identities = 226/338 (67%), Gaps = 12/338 (4%) Strand=Plus/Plus Query 30083 TGGCACGGAGGAAGAGCCAT--GAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGA 30140 ||||| || ||||||||||| |||| | ||| |||||||||||| || ||||| Sbjct 1 TGGCAAGGCGGAAGAGCCATCTGAGGG--ATGTCGACTGGGTTCCAGGCGGTCATGATGA 58 Query 30141 TGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCC 30200 | || | ||| | ||||| | | ||| | || | || |||||||| | | Sbjct 59 TTCGGCGGTCGTTAGGGTTCGTTTTAATGCGCTCAATCAACCCCTGGAGCTGATCGATTC 118 Query 30201 CCATCCCCGAGTAGTCTGCCCTCATG----TCCGTGTACTCTGCTCCGAAATGCCTCCAC 30256 | ||| ||||| | ||| || |||||||||||||| || ||||||||| Sbjct 119 CTTGCCCATCGTAGTTA----TTATGGCAATCTGTGTACTCTGCTCCAAAGTGCCTCCAC 174 Query 30257 TGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCC 30316 || ||||| || || ||||||| || |||||||| | | |||||| | ||| || Sbjct 175 TGAAACCCATATACTGGTCCCAAATCGCCCTCTTCGCGATTGGTGAAGCCGCACTTATCG 234 Query 30317 AAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCAGAGAGCTCTTTG 30376 | || || | || | ||| |||||||||| | | ||||| || | ||| Sbjct 235 AGGAATTCCCGGGCGCTGTTCCCGTCCCAGATATGAATGTTTTTCTCCTGAAGGGCCTTG 294 Query 30377 GAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTC 30414 | || ||| |||| ||| ||||||||| |||||||| Sbjct 295 GCGTCCGTGCTCCCTTTGATGAACCACAGGAGCTCCTC 332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406237631711940