Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq3563 156 4e-33 seq3509 152 5e-32 >seq3563 Length=1406 Score = 156 bits (172), Expect = 4e-33 Identities = 202/279 (72%), Gaps = 0/279 (0%) Strand=Plus/Plus Query 34519 GAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCTGAT 34578 ||||||| | ||| | | ||| | ||| ||| |||||||| || |||||| ||| Sbjct 41 GAACCCTAACGACCGCCGAATCATCATGACCGCCTGGAACCCAGTCGACATCCCTCAGAT 100 Query 34579 GGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTGTCCTG 34638 ||| || || || |||||| |||| ||| ||||| || || || || ||||| || || Sbjct 101 GGCTCTTCCGCCTTGCCACTGCCTCGTCCAGTTCTATGTTGCAAACGGAGAGCTATCGTG 160 Query 34639 CCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGTTA 34698 |||||||||||| | || | |||||||| | ||||| || || ||||| || || || Sbjct 161 CCAGCTCTATCAGAGGTCTGCCGACATGGGACTGGGGGTCCCTTTTAACATCGCCAGCTA 220 Query 34699 CGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGTTGGTTCCTGGGGAGCTGGTGCA 34758 ||| || || || |||||| | ||||| ||| || ||| ||||| || | || || Sbjct 221 CGCCCTTCTTACTTACATGGTTGCTCACGTCACAGGCTTGAAGCCTGGAGATTTTGTCCA 280 Query 34759 TACGTTGGGGGATGCGCATATCTACCTGAACCACATCGA 34797 ||| || || ||||| ||| | || ||||| ||||| || Sbjct 281 TACCTTTGGAGATGCTCATGTATATCTGAATCACATTGA 319 Score = 156 bits (172), Expect = 4e-33 Identities = 202/279 (72%), Gaps = 0/279 (0%) Strand=Plus/Minus Query 6548 TCGATGTGGTTCAGGTAGATATGCGCATCCCCCAACGTATGCACCAGCTCCCCAGGAACC 6607 || ||||| ||||| || | ||| ||||| || || ||||| || | || ||||| | Sbjct 319 TCAATGTGATTCAGATATACATGAGCATCTCCAAAGGTATGGACAAAATCTCCAGGCTTC 260 Query 6608 AACCCCACGACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGC 6667 || || ||| ||||| | |||||| || || || ||||| || || ||||| || || Sbjct 259 AAGCCTGTGACGTGAGCAACCATGTAAGTAAGAAGGGCGTAGCTGGCGATGTTAAAAGGG 200 Query 6668 ACCCCTAACCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCG 6727 ||||| | |||||||| | || | |||||||||||||| || ||||| || || || Sbjct 199 ACCCCCAGTCCCATGTCGGCAGACCTCTGATAGAGCTGGCACGATAGCTCTCCGTTTGCA 140 Query 6728 ACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGG 6787 || ||||| ||| |||| |||||| || || || |||||| |||||| || ||| Sbjct 139 ACATAGAACTGGACGAGGCAGTGGCAAGGCGGAAGAGCCATCTGAGGGATGTCGACTGGG 80 Query 6788 TTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTC 6826 ||||| ||| ||| | ||| | | ||| | ||||||| Sbjct 79 TTCCAGGCGGTCATGATGATTCGGCGGTCGTTAGGGTTC 41 >seq3509 Length=1415 Score = 152 bits (168), Expect = 5e-32 Identities = 201/279 (72%), Gaps = 0/279 (0%) Strand=Plus/Plus Query 6548 TCGATGTGGTTCAGGTAGATATGCGCATCCCCCAACGTATGCACCAGCTCCCCAGGAACC 6607 || ||||| ||||| || | ||| ||||| || || ||||| || | || ||||| | Sbjct 1097 TCAATGTGATTCAGATATACATGAGCATCTCCAAAGGTATGGACAAAATCTCCAGGCTTC 1156 Query 6608 AACCCCACGACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGC 6667 || || ||| ||||| | |||||| || || || ||||| || || ||||| || || Sbjct 1157 AAGCCTGTGACGTGAGCAACCATGTAAGTAAGAAGGGCGTAGCTGGCGATGTTAAAAGGG 1216 Query 6668 ACCCCTAACCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCG 6727 ||||| | |||||||| | || | |||||||||||||| || ||||| || || || Sbjct 1217 ACCCCCAGTCCCATGTCGGCAGACCTCTGATAGAGCTGGCACGATAGCTCTCCGTTTGCA 1276 Query 6728 ACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGG 6787 || ||||| ||| |||| ||||| || || || |||||| |||||| || ||| Sbjct 1277 ACATAGAACTGGACGAGGCAATGGCAAGGCGGAAGAGCCATCTGAGGGATGTCGACTGGG 1336 Query 6788 TTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTC 6826 ||||| ||| ||| | ||| | | ||| | ||||||| Sbjct 1337 TTCCAGGCGGTCATGATGATTCGGCGGTCGTTAGGGTTC 1375 Score = 152 bits (168), Expect = 5e-32 Identities = 201/279 (72%), Gaps = 0/279 (0%) Strand=Plus/Minus Query 34519 GAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCTGAT 34578 ||||||| | ||| | | ||| | ||| ||| |||||||| || |||||| ||| Sbjct 1375 GAACCCTAACGACCGCCGAATCATCATGACCGCCTGGAACCCAGTCGACATCCCTCAGAT 1316 Query 34579 GGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTGTCCTG 34638 ||| || || || ||||| |||| ||| ||||| || || || || ||||| || || Sbjct 1315 GGCTCTTCCGCCTTGCCATTGCCTCGTCCAGTTCTATGTTGCAAACGGAGAGCTATCGTG 1256 Query 34639 CCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGTTA 34698 |||||||||||| | || | |||||||| | ||||| || || ||||| || || || Sbjct 1255 CCAGCTCTATCAGAGGTCTGCCGACATGGGACTGGGGGTCCCTTTTAACATCGCCAGCTA 1196 Query 34699 CGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGTTGGTTCCTGGGGAGCTGGTGCA 34758 ||| || || || |||||| | ||||| ||| || ||| ||||| || | || || Sbjct 1195 CGCCCTTCTTACTTACATGGTTGCTCACGTCACAGGCTTGAAGCCTGGAGATTTTGTCCA 1136 Query 34759 TACGTTGGGGGATGCGCATATCTACCTGAACCACATCGA 34797 ||| || || ||||| ||| | || ||||| ||||| || Sbjct 1135 TACCTTTGGAGATGCTCATGTATATCTGAATCACATTGA 1097 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448180059800400