Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq10 158 3e-33 seq39 150 4e-31 >seq10 Length=2329298 Score = 158 bits (174), Expect = 3e-33 Identities = 168/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 |||||||| |||||||| || | || ||||| || |||||||||||||| | || || Sbjct 1255239 CGAAGTCTAAGGACAAGATGCAAGGTTGACTCCTTCTGGATGTTATAATCGGACAGAGTG 1255180 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | ||||| || || || || || || || || | ||||| || || ||||||| |||| Sbjct 1255179 CGGCCATCCTCGAGTTGTTTACCGGCAAAAATCAAACGTTGCTGATCTGGAGGAATTCCT 1255120 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 ||||| |||||||| || || || ||||| ||||| ||||| |||||| || | | Sbjct 1255119 TCCTTATCCTGGATTTTAGCCTTGACATTTTCAATGGTATCAGAAGGTTCAACTTCCAAA 1255060 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 |||||||| || ||||| | ||||| ||||| | ||||||| Sbjct 1255059 GTGATCGTTTTACCCGTCAAGGTCTTCACAAAAATCTGCATT 1255018 Score = 150 bits (166), Expect = 4e-31 Identities = 172/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949 || |||||| | ||||| | || || || ||||| ||||| ||||||||||| | || Sbjct 1252963 TCCACGAAGACGAAGGACCAAATGTAGGGTCGACTCCTTTTGAATGTTATAATCAGACAG 1252904 Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009 || | |||||||| ||||| ||||| || ||||| | | ||| ||||| ||||||| Sbjct 1252903 CGTGCGACCATCTTCTAGCTGTTTGCCAGCAAAGATCAATCTTTGCTGGTCTGGAGGAAT 1252844 Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069 ||| || || ||||| ||||| || |||||||| ||||| ||||| ||||| || Sbjct 1252843 TCCCTCTTTATCCTGAATCTTAGCCTTAACGTTTTCAATGGTATCAGAAGGCTCAACTTC 1252784 Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTTATG 211120 | ||||| || || || || || ||||| ||||| | ||||||||| || Sbjct 1252783 CAAGGTGATAGTTTTGCCTGTTAGTGTCTTCACAAAGATCTGCATTTTGTG 1252733 Score = 149 bits (164), Expect = 1e-30 Identities = 168/225 (75%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949 || ||||||||| || || | ||| ||||||||||| || || |||||||| || | ||| Sbjct 1254787 TCCACGAAGTCTCAGTACCAAGTGGAGAGTGGACTCCTTCTGAATGTTATAGTCGGAAAG 1254728 Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009 || | ||| ||||||| |||||||| || || || | | || ||||| || || | Sbjct 1254727 TGTGCGTCCGTCTTCCAATTGCTTGCCAGCAAAAATTAATCTCTGCTGGTCTGGGGGGAT 1254668 Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069 |||||||| ||||| ||||| ||||| ||||| || |||||||| |||||| || Sbjct 1254667 GCCTTCCTTATCCTGAATCTTAGCCTTCACATTTTCAATAGTGTCAGAAGGTTCAACTTC 1254608 Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 | ||| ||||| || || || | ||||| ||||| | |||||| Sbjct 1254607 CAAAGTAATCGTTTTGCCAGTCAACGTCTTAACAAAAATCTGCAT 1254563 Score = 147 bits (162), Expect = 5e-30 Identities = 168/226 (74%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949 || |||||||| ||||| | ||| ||||| || || ||||| || || ||||| | ||| Sbjct 1254331 TCCACGAAGTCGGAGGACCAAGTGGAGAGTAGATTCCTTTTGAATATTGTAATCAGAAAG 1254272 Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAAC 211009 || | ||||||||||| ||||| || || |||||||| ||||| || || || |||| Sbjct 1254271 TGTGCGTCCATCTTCCAATTGCTTTCCAGCAAAGATAAGACGTTGCTGATCTGGGGGAAT 1254212 Query 211010 TCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069 ||||||||| ||||| || || || || ||||||||||| || || ||| || || Sbjct 1254211 TCCTTCCTTATCCTGAATTTTAGCCTTAACATTTTCGATGGTATCGGATGGTTCGACTTC 1254152 Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 | || ||||| || || || | ||| || || || | ||||||| Sbjct 1254151 CAATGTTATCGTTTTACCAGTCAAAGTTTTCACGAAGATCTGCATT 1254106 Score = 141 bits (156), Expect = 2e-28 Identities = 161/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| || ||||| ||||| || |||||||||||||| || ||||| | || || | || Sbjct 1253182 TCTCAGCACAAGATGAAGGGTAGACTCTTTTTGGATATTGTAATCGGAGAGTGTACGACC 1253123 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 ||| |||| ||| || || || |||||||| || ||||| || || |||| || || || Sbjct 1253122 ATCCTCCAACTGTTTTCCAGCAAAGATAAGACGCTGTTGATCTGGTGGAATGCCCTCTTT 1253063 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| || || || |||||| || || || || |||||| |||||| || | ||||| Sbjct 1253062 GTCTTGAATTTTAGCTTTCACATTCTCAATTGTATCAGAGGGTTCAACTTCCAAGGTGAT 1253003 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 |||||| || || ||||| || || || | ||||| Sbjct 1253002 CGTCTTGCCAGTAAGAGTTTTCACGAAAATTTGCAT 1252967 Score = 136 bits (150), Expect = 9e-27 Identities = 152/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 || |||||||| || || ||||||||||| || | | || | || ||||||| ||| Sbjct 1254993 TGGAGAGTGGATTCCTTCTGGATGTTATAGTCGGACAAAGTGCGACCGTCTTCCAATTGC 1254934 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 || || || |||||||| |||||||| || ||||||| ||||| |||||||| ||||| Sbjct 1254933 TTACCAGCAAAGATAAGACGTTGTTGATCTGGAGGAATCCCTTCTTTGTCCTGAATCTTG 1254874 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091 || ||||| || || ||||| || ||||||||| | |||||| || || || || Sbjct 1254873 GCCTTAACGTTCTCAATTGTGTCTGACGGTTCAACCTCCAAAGTGATAGTTTTGCCGGTT 1254814 Query 211092 AGAGTCTTTACAAACACCTGCAT 211114 | |||||| || || | ||||| Sbjct 1254813 AAAGTCTTCACGAAGATTTGCAT 1254791 Score = 132 bits (146), Expect = 1e-25 Identities = 157/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || || ||||| || ||||| ||||||||||| ||||| | | || | |||||| Sbjct 1253862 AGAACTAGATGAAGTGTTGACTCCTTTTGGATGTTGTAATCGGACAAAGTGCGACCATCT 1253803 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||| |||||| || || ||||| | ||||| || || || |||| ||||| |||||| Sbjct 1253802 TCCAACTGCTTACCGGCAAAGATCAATCGTTGCTGATCTGGTGGAATACCTTCTTTGTCC 1253743 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||| || || || || ||||| || || || ||||||||| | || || ||| Sbjct 1253742 TGGATTTTAGCCTTAACATTCTCGATCGTATCTGATGGTTCAACCTCCAATGTAATTGTC 1253683 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 || || || | |||||| || || | ||||||| Sbjct 1253682 TTACCGGTCAAAGTCTTAACGAAAATCTGCATT 1253650 Score = 114 bits (126), Expect = 3e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || || || ||||| ||||| ||||||||||| ||||| | | || | ||||| Sbjct 1254090 AGAACCAGATGGAGAGTTGACTCCTTTTGGATGTTGTAATCGGACAAAGTGCGACCATCC 1254031 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || | || || || || ||||| || ||||| || || || || | || ||||| || Sbjct 1254030 TCTAATTGTTTACCGGCAAAGATGAGTCGTTGCTGATCCGGTGGGATACCCTCCTTATCT 1253971 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| ||| || || || ||||| || || || || || |||||||| || Sbjct 1253970 TGGATCTTAGCTTTAACATTCTCAATGGTATCGGATGGCTCGACTTCCAGAGTGATAGTT 1253911 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 || || || | ||||||||||| | ||||||| Sbjct 1253910 TTGCCAGTCAATGTCTTTACAAAGATCTGCATT 1253878 Score = 107 bits (118), Expect = 4e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | |||||| || |||||||| ||||| || || || | | || | ||||| Sbjct 1254546 AGCACCAAGTGAAGGGTCGACTCTTTCTGGATATTGTAGTCAGATAATGTGCGCCCATCC 1254487 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||| || || || || || || | ||||| || || || |||| ||||| ||||| Sbjct 1254486 TCCAATTGTTTACCAGCAAAAATCAAACGTTGCTGATCTGGTGGAATGCCTTCTTTGTCT 1254427 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || || ||||| || ||||||||| || || || | ||||| ||| Sbjct 1254426 TGAATCTTAGCCTTTACATTTTCAATAGTGTCAGAGGGCTCGACTTCCAAGGTGATGGTC 1254367 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || | |||||||||||| | ||||| Sbjct 1254366 TTCCCAGTTAAAGTCTTTACAAAAATTTGCAT 1254335 >seq39 Length=1160777 Score = 150 bits (166), Expect = 4e-31 Identities = 165/218 (76%), Gaps = 1/218 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | ||| || || ||||| || |||||||| ||||| | ||| || | ||||| Sbjct 535134 AGCACCAAGTGCAGGGTAGACTCCTTCTGGATGTTGTAATCGGAAAGTGTGCGACCATCC 535075 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||| || || ||||| || || || ||||| || || || | ||| ||||||||| Sbjct 535074 TCAAGCTGTTTACCGGCGAAAATCAGACGCTGTTGATCTGGGGGGATTCCCTCCTTGTCC 535015 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| ||| || ||||| || ||||| ||| || ||||| |||||||| ||| Sbjct 535014 TGGATCTTCGCTTTGACATTTTCAATAGTGTCTGAGGGCTCGACCTCAAGAGTGATGGTC 534955 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT-TTTAT 211119 || || || || || ||||| || | |||||| ||||| Sbjct 534954 TTACCGGTTAGGGTTTTTACGAAGATCTGCATGTTTAT 534917 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1158933755223675