Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq10 100 2e-16 seq39 91.5 1e-13 >seq10 Length=2329298 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117 |||||||| || | | ||| | ||| || || ||||||||| ||||| ||||||| Sbjct 1253193 CCTCCTCTCAATCTCAGCACAAGATGAAGGGTAGACTCTTTTTGGATATTGTAATCGGAG 1253134 Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177 ||||| || | || || | |||||| || ||||| ||||||||||| || || | || Sbjct 1253133 AGTGTACGACCATCCTCCAACTGTTTTCCAGCAAAGATAAGACGCTGTTGATCTGGTGGA 1253074 Query 39178 ACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACG 39237 | || ||||||||| ||||| ||| | || | | ||||| | || || Sbjct 1253073 ATGCCCTCTTTGTCTTGAATTTTAGCTTTCACATTCTCAATTGTATCAGAGGGTTCAACT 1253014 Query 39238 TCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATC 39285 |||| ||||| | || || || || ||||| || || ||||||||| Sbjct 1253013 TCCAAGGTGATCGTCTTGCCAGTAAGAGTTTTCACGAAAATTTGCATC 1252966 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 ||||||||||| || ||| ||||| || |||||||| | || || || | || || Sbjct 1252947 ACCAAATGTAGGGTCGACTCCTTTTGAATGTTATAATCAGACAGCGTGCGACCATCTTCT 1252888 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||||||||| ||||| || | | |||||||| | || | | |||||| ||| || Sbjct 1252887 AGCTGTTTGCCAGCAAAGATCAATCTTTGCTGGTCTGGAGGAATTCCCTCTTTATCC-TG 1252829 Query 39196 ATTTTCTGTTTGAGCG-TCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 | | | | | | || | | | ||||| | ||| || |||| |||||| |||| Sbjct 1252828 AATCTTAGCCTTAACGTTTTCAATGGTATCAGAAGGCTCAACTTCCAAGGTGATAGTTTT 1252769 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCATCTT 39287 || || || || || |||||||| ||||| || Sbjct 1252768 GCCTGTTAGTGTCTTCACAAAGATCTGCATTTT 1252736 >seq39 Length=1160777 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 |||||| || || || ||| || || || || ||||||| |||||| || | || || Sbjct 535132 CACCAAGTGCAGGGTAGACTCCTTCTGGATGTTGTAATCGGAAAGTGTGCGACCATCCTC 535073 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 ||||||||| || || || || |||||||| || || | ||| | | ||| |||||| Sbjct 535072 AAGCTGTTTACCGGCGAAAATCAGACGCTGTTGATCTGGGGGGATTCCCTCCTTGTCCTG 535013 Query 39195 GATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 ||| ||| ||||| | | | || || | ||| || || | ||||| | || Sbjct 535012 GATCTTCGCTTTGACATTTTCAATAGTGTCTGAGGGCTCGACCTCAAGAGTGATGGTCTT 534953 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCATCTTTA 39289 || || || ||||| || ||||| ||||| |||| Sbjct 534952 ACCGGTTAGGGTTTTTACGAAGATCTGCATGTTTA 534918 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429468670396535