Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq10 129 4e-25 seq39 118 7e-22 seq44 116 3e-21 >seq10 Length=2329298 Score = 129 bits (142), Expect = 4e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| |||||||| ||||| || || || || |||||||| | |||||||| || | Sbjct 1252967 ATGCAAATTTTCGTGAAAACTCTTACTGGCAAGACGATCACCTTGGAAGTTGAACCCTCT 1253026 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || |||| ||| | ||| | |||| || |||||||| || | || |||||||| Sbjct 1253027 GATACAATTGAGAATGTGAAAGCTAAAA-TTCAAGACAAAGAGGGCATTCCACCAGATCA 1253085 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||||| | || ||||| || ||||| |||| || | || || | ||||||||| Sbjct 1253086 ACAGCGTCTTATCTTTGCTGGAAAACAGTTGGAGGATGGTCGTACACTCTCCGATTACAA 1253145 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || ||||||||||| || | ||| | || | || ||| ||||||| Sbjct 1253146 TATCCAAAAAGAGTCTACCCTTCATCTTGTGCTGAGATTGAGAGGAGG 1253193 Score = 125 bits (138), Expect = 5e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || ||||| || || || ||||| || || | |||||||| | | Sbjct 1253195 ATGCAGATTTTTGTAAAAACACTGACTGGGAAAACAATTACATTAGAAGTTGAGCCTTCT 1253254 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || |||||| | ||| ||||| || ||||||||| | || ||||||||| Sbjct 1253255 GATACAATTGAAAATGTGAAAGCCAAAATCCAAGATAAAGAAGGTATTCCTCCAGATCAA 1253314 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||||| || ||||| || ||||| || || || | || ||| | ||| || ||| Sbjct 1253315 CAGCGTTTGATTTTTGCTGGTAAACAGCTTGAGGATGGTCGTACTCTCTCCGACTATAAC 1253374 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || || || || ||||| ||||||||||| || | | || ||||| Sbjct 1253375 ATTCAGAAGGAATCCACTCTACATTTAGTTCTACGTCTTCGCGGAGG 1253421 Score = 125 bits (138), Expect = 5e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||||||||| || || ||| | ||||| |||||||||||| | |||||||| | | Sbjct 1255018 AATGCAGATTTTTGTGAAGACCTTGACGGGTAAAACGATCACTTTGGAAGTTGAACCTTC 1255077 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || |||||| | || ||||| || || ||||| | || |||||||| Sbjct 1255078 TGATACCATTGAAAATGTCAAGGCTAAAATCCAGGATAAGGAAGGAATTCCTCCAGATCA 1255137 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 || ||||| || |||||||| |||||||| || || | |||||| | |||||| || Sbjct 1255138 GCAACGTTTGATTTTTGCCGGTAAACAACTCGAGGATGGCCGCACTCTGTCCGATTATAA 1255197 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 ||| || || ||||| || || ||| | || | || | ||||| ||| Sbjct 1255198 CATCCAGAAGGAGTCAACCTTGCATCTTGTCCTTAGACTTCGAGGTGGA 1255246 Score = 123 bits (136), Expect = 2e-23 Identities = 156/212 (74%), Gaps = 2/212 (1%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||||||||||||||| || | || || || || || || | || ||||| | | Sbjct 1253650 AATGCAGATTTTCGTTAAGACTTTGACCGGTAAGACAATTACATTGGAGGTTGAACCATC 1253709 Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 || || | || ||| |||| | |||| | |||||||||||| | || ||||||| Sbjct 1253710 AGATACGATCGAGAATGTTAAGGCTAAAA-TCCAGGACAAAGAAGGTATTCCACCAGATC 1253768 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 | || || || || |||||||| || || ||||||| | |||||||| |||||||| Sbjct 1253769 AGCAACGATTGATCTTTGCCGGTAAGCAGTTGGAAGATGGTCGCACTTTGTCCGATTACA 1253828 Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGTT 23820 |||| ||||| ||||| ||| | ||| ||||| Sbjct 1253829 ACATCCAAAAGGAGTCAACACTTCATCTAGTT 1253860 Score = 116 bits (128), Expect = 3e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| ||||| || | || || |||||||| ||| | |||||||| | | Sbjct 1254563 ATGCAGATTTTTGTTAAGACGTTGACTGGCAAAACGATTACTTTGGAAGTTGAACCTTCT 1254622 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 |||||| |||||| | || || ||| || || ||||| | || ||||| || Sbjct 1254623 GACACTATTGAAAATGTGAAGGCTAAGATTCAGGATAAGGAAGGCATCCCCCCAGACCAG 1254682 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | ||||| ||||| ||||| ||| ||||||||| |||||| | ||| || ||| Sbjct 1254683 CAGAGATTAATTTTTGCTGGCAAGCAATTGGAAGACGGACGCACACTTTCCGACTATAAC 1254742 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || |||||||| Sbjct 1254743 ATTCAGAAGGAGTCCAC 1254759 Score = 113 bits (124), Expect = 3e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| ||||| || || || ||||||||||| | |||||||| | | Sbjct 1253423 ATGCAGATTTTCGTGAAAACTCTTACTGGCAAAACGATCACATTGGAAGTTGAACCTTCT 1253482 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 |||||| |||||| | || ||| ||| || || ||||| | || |||||||| Sbjct 1253483 GACACTATTGAAAATGTGAAGGCAAAGATTCAAGATAAGGAAGGAATTCCTCCAGATCAG 1253542 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || || | || ||||| || |||||| |||| || | || || ||| ||||| || Sbjct 1253543 CAACGACTCATCTTTGCTGGGAAACAATTGGAGGATGGCCGTACCTTATCTGATTATAAT 1253602 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || |||||||| Sbjct 1253603 ATTCAGAAGGAGTCCAC 1253619 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||| || || || | || || || || ||||| | ||||| || || | Sbjct 1254335 ATGCAAATTTTTGTAAAGACTTTAACTGGGAAGACCATCACCTTGGAAGTCGAGCCCTCT 1254394 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 |||||| |||||| |||| || ||| ||||||||||| | || |||||||| Sbjct 1254395 GACACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAAGAAGGCATTCCACCAGATCAG 1254454 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || ||||| || ||||| || |||||| |||| || | ||||| ||| || ||||| Sbjct 1254455 CAACGTTTGATTTTTGCTGGTAAACAATTGGAGGATGGGCGCACATTATCTGACTACAAT 1254514 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || || |||||||| || | || || || | | |||||||||| Sbjct 1254515 ATCCAGAAAGAGTCGACCCTTCACTTGGTGCTTCGCCTGCGAGGAGG 1254561 Score = 111 bits (122), Expect = 1e-19 Identities = 152/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || ||||| || || | || || ||||| |||||| | || ||||| | | Sbjct 1254791 ATGCAAATCTTCGTGAAGACTTTAACCGGCAAAACTATCACTTTGGAGGTTGAACCGTCA 1254850 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| || |||| | || | || ||||||||||| | || |||||||| Sbjct 1254851 GACACAATTGAGAACGTTAAGGCCAAGA-TTCAGGACAAAGAAGGGATTCCTCCAGATCA 1254909 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| ||| | || ||||| || || ||| ||||||||| |||||||| ||| || || Sbjct 1254910 ACAACGTCTTATCTTTGCTGGTAAGCAATTGGAAGACGGTCGCACTTTGTCCGACTATAA 1254969 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGT 23819 ||| || || || ||||| | ||||| || Sbjct 1254970 CATCCAGAAGGAATCCACTCTCCATTTGGT 1254999 Score = 100 bits (110), Expect = 2e-16 Identities = 151/212 (71%), Gaps = 2/212 (1%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||| || || || || | || || ||||| |||||||| ||||| || | | Sbjct 1253878 AATGCAGATCTTTGTAAAGACATTGACTGGCAAAACTATCACTCTGGAAGTCGAGCCATC 1253937 Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 || || |||| ||| ||||| | || | | || || || ||| | || || |||| Sbjct 1253938 CGATACCATTGAGAATGTTAAAGCTAAGA-TCCAAGATAAGGAGGGTATCCCACCGGATC 1253996 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 | || || | || |||||||| |||||| | || || | |||||||| |||||||| Sbjct 1253997 AGCAACGACTCATCTTTGCCGGTAAACAATTAGAGGATGGTCGCACTTTGTCCGATTACA 1254056 Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGTT 23820 |||| ||||| ||||| || | ||| | ||| Sbjct 1254057 ACATCCAAAAGGAGTCAACTCTCCATCTGGTT 1254088 Score = 95.1 bits (104), Expect = 8e-15 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 ||||||||||| || || || || || || || ||||| ||||| | |||||||| | Sbjct 1252736 AAAATGCAGATCTTTGTGAAGACACTAACAGGCAAAACTATCACCTTGGAAGTTGAGCCT 1252795 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 | || || |||||| | || || ||| || ||||| || | || ||||| Sbjct 1252796 TCTGATACCATTGAAAACGTTAAGGCTAAGATTCAGGATAAAGAGGGAATTCCTCCAGAC 1252855 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || || | || || ||||| |||||||| || ||||| | ||||| | ||||| Sbjct 1252856 CAGCAAAGATTGATCTTTGCTGGCAAACAGCTAGAAGATGGTCGCACGCTGTCTGATTAT 1252915 Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGT 23819 ||||| ||||| ||||| || ||||||| || Sbjct 1252916 AACATTCAAAAGGAGTCGACCCTACATTTGGT 1252947 >seq39 Length=1160777 Score = 118 bits (130), Expect = 7e-22 Identities = 153/210 (73%), Gaps = 1/210 (0%) Strand=Plus/Plus Query 23599 TAATTACTTAAA-ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGA 23657 ||||| |||| |||||||| ||||| |||||||| || || || || |||||||| || Sbjct 534910 TAATTCGATAAACATGCAGATCTTCGTAAAAACCCTAACCGGTAAGACCATCACTCTTGA 534969 Query 23658 AGTTGACTCCACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGT 23717 || || || | |||||| |||||| | ||| || || ||||| || || | Sbjct 534970 GGTCGAGCCCTCAGACACTATTGAAAATGTCAAAGCGAAGATCCAGGACAAGGAGGGAAT 535029 Query 23718 ACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTT 23777 || ||||||||||||||| | || || ||||| ||||| || || || | ||||| | Sbjct 535030 CCCCCCAGATCAACAGCGTCTGATTTTCGCCGGTAAACAGCTTGAGGATGGTCGCACACT 535089 Query 23778 AGGCGATTACAACATACAAAAAGAGTCCAC 23807 |||||||||||| || || ||||| || Sbjct 535090 TTCCGATTACAACATCCAGAAGGAGTCTAC 535119 >seq44 Length=1094211 Score = 116 bits (128), Expect = 3e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| |||||||| || ||||| ||||| || || |||||||| || || || || | Sbjct 805342 ATGCAAATTTTCGTAAAGACCCTAACGGGCAAGACCATCACTCTTGAGGTCGAACCCTCT 805401 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || ||| |||||| | ||| ||| ||| || ||||||||| | || ||||||||| Sbjct 805402 GATACTATTGAAAATGTCAAAGCAAAGATTCAAGATAAAGAAGGTATTCCCCCAGATCAA 805461 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || ||| | || ||||| || |||||| |||| || | || || | ||| ||||| Sbjct 805462 CAACGTCTGATCTTTGCTGGTAAACAATTGGAGGATGGTCGTACACTGTCCGACTACAAT 805521 Query 23791 ATACAAAAAGAGTCCAC 23807 || ||||| || || || Sbjct 805522 ATCCAAAAGGAATCAAC 805538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337949064065060