Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq10 159 8e-34 seq44 143 6e-29 seq74 102 2e-16 >seq10 Length=2329298 Score = 159 bits (176), Expect = 8e-34 Identities = 169/223 (76%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||||| ||||| | ||||||||| ||||| ||||| | ||||||||| | | || Sbjct 1254328 ACGAAGTCGGAGGACCAAGTGGAGAGTAGATTCCTTTTGAATATTGTAATCAGAAAGTGT 1254269 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| | ||||| ||||| |||||||| ||||| || || || ||||| || Sbjct 1254268 GCGTCCATCTTCCAATTGCTTTCCAGCAAAGATAAGACGTTGCTGATCTGGGGGAATTCC 1254209 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||| || || || || ||| ||| ||||||||| || || | ||| || || || Sbjct 1254208 TTCCTTATCCTGAATTTTAGCCTTAACATTTTCGATGGTATCGGATGGTTCGACTTCCAA 1254149 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 || ||||| || || ||||||||||| | ||| | |||||| Sbjct 1254148 TGTTATCGTTTTACCAGTCAAAGTTTTCACGAAGATCTGCATT 1254106 Score = 154 bits (170), Expect = 4e-32 Identities = 166/217 (76%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 |||||| ||||| || || || || |||||||||| ||||||||||| | || | || Sbjct 1253182 TCTCAGCACAAGATGAAGGGTAGACTCTTTTTGGATATTGTAATCGGAGAGTGTACGACC 1253123 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 ||| || | ||| || ||||| |||||||| || ||||| || || ||||| || || || Sbjct 1253122 ATCCTCCAACTGTTTTCCAGCAAAGATAAGACGCTGTTGATCTGGTGGAATGCCCTCTTT 1253063 Query 225618 GTCTTGGATCTTTTGCTT-CACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGA 225676 |||||| || ||| |||| |||| || || || || |||| ||| || || || |||| Sbjct 1253062 GTCTTGAAT-TTTAGCTTTCACATTCTCAATTGTATCAGAGGGTTCAACTTCCAAGGTGA 1253004 Query 225677 TCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||||||| || | |||||| | ||| | |||||| Sbjct 1253003 TCGTCTTGCCAGTAAGAGTTTTCACGAAAATTTGCAT 1252967 Score = 150 bits (166), Expect = 4e-31 Identities = 167/223 (75%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | ||| || || || || || || || ||||||| |||||||||| |||||| Sbjct 1253872 ACGTAGACGCAGAACTAGATGAAGTGTTGACTCCTTTTGGATGTTGTAATCGGACAAAGT 1253813 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| | |||||| || || ||||| | |||||| || || || |||||||| Sbjct 1253812 GCGACCATCTTCCAACTGCTTACCGGCAAAGATCAATCGTTGCTGATCTGGTGGAATACC 1253753 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||| ||||| ||||| || ||| ||| ||||| || ||||| | ||| || || || Sbjct 1253752 TTCTTTGTCCTGGATTTTAGCCTTAACATTCTCGATCGTATCTGATGGTTCAACCTCCAA 1253693 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 || || ||||| || |||||||| || | ||| | |||||| Sbjct 1253692 TGTAATTGTCTTACCGGTCAAAGTCTTAACGAAAATCTGCATT 1253650 Score = 145 bits (160), Expect = 2e-29 Identities = 154/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 225511 TGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGC 225570 |||||||||||||| || |||| || || |||| |||||| | || ||||| | ||| Sbjct 1254993 TGGAGAGTGGATTCCTTCTGGATGTTATAGTCGGACAAAGTGCGACCGTCTTCCAATTGC 1254934 Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630 || ||||| |||||||| |||||||| || || ||||| ||||| ||||| || ||||| Sbjct 1254933 TTACCAGCAAAGATAAGACGTTGTTGATCTGGAGGAATCCCTTCTTTGTCCTGAATCTTG 1254874 Query 225631 TGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTC 225690 ||| || || || |||||||| | ||| || || || ||||| || ||||| || Sbjct 1254873 GCCTTAACGTTCTCAATTGTGTCTGACGGTTCAACCTCCAAAGTGATAGTTTTGCCGGTT 1254814 Query 225691 AAAGTTTTTATGAACACTTGCAT 225713 ||||| || | ||| | |||||| Sbjct 1254813 AAAGTCTTCACGAAGATTTGCAT 1254791 Score = 136 bits (150), Expect = 9e-27 Identities = 164/223 (74%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | ||| || || |||||||| || || ||||||| |||||||||| |||||| Sbjct 1254100 ACGTAGACGCAGAACCAGATGGAGAGTTGACTCCTTTTGGATGTTGTAATCGGACAAAGT 1254041 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| |||| || || || || ||||| |||||||| || || || || ||||| Sbjct 1254040 GCGACCATCCTCTAATTGTTTACCGGCAAAGATGAGTCGTTGCTGATCCGGTGGGATACC 1253981 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||| ||||||||||| || ||| || ||||| || || | || || || | Sbjct 1253980 CTCCTTATCTTGGATCTTAGCTTTAACATTCTCAATGGTATCGGATGGCTCGACTTCCAG 1253921 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 ||||| || ||||| ||||| || |||| || | |||||| Sbjct 1253920 AGTGATAGTTTTGCCAGTCAATGTCTTTACAAAGATCTGCATT 1253878 Score = 122 bits (134), Expect = 2e-22 Identities = 151/207 (73%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||||||||| || | |||||||||||| || || || | || || |||| | || Sbjct 1254784 ACGAAGTCTCAGTACCAAGTGGAGAGTGGACTCCTTCTGAATGTTATAGTCGGAAAGTGT 1254725 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || ||||| | ||||| ||||| || || | || || ||||| || || || || Sbjct 1254724 GCGTCCGTCTTCCAATTGCTTGCCAGCAAAAATTAATCTCTGCTGGTCTGGGGGGATGCC 1254665 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||| || || ||||| ||||||| ||| || ||||| || | ||| || || || Sbjct 1254664 TTCCTTATCCTGAATCTTAGCCTTCACATTTTCAATAGTGTCAGAAGGTTCAACTTCCAA 1254605 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTT 225698 || ||||| ||||| ||||| || || Sbjct 1254604 AGTAATCGTTTTGCCAGTCAACGTCTT 1254578 Score = 109 bits (120), Expect = 1e-18 Identities = 159/222 (72%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||| | || || | || ||||||||||| || || | || || |||| | ||| Sbjct 1253415 CGAAGACGTAGAACTAAATGTAGAGTGGATTCCTTCTGAATGTTATAGTCGGAGAGAGTA 1253356 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | ||||| || ||||| || ||||| || || | || ||||| || || ||||||||| Sbjct 1253355 CGACCATCCTCAAGCTGTTTACCAGCAAAAATCAAACGCTGTTGATCTGGAGGAATACCT 1253296 Query 225613 TCCTTGTCTTGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 || || |||||||| ||| || |||||| ||| || || || || | || || ||||| Sbjct 1253295 TCTTTATCTTGGAT-TTTGGCTTTCACATTTTCAATTGTATCAGAAGGCTCAACTTCTAA 1253237 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || || || |||| ||||||| || | ||||| Sbjct 1253236 TGTAATTGTTTTCCCAGTCAGTGTTTTTACAAAAATCTGCAT 1253195 Score = 105 bits (116), Expect = 2e-17 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | ||||| | || || || || || ||||| | || ||||| | || || Sbjct 1252960 ACGAAGACGAAGGACCAAATGTAGGGTCGACTCCTTTTGAATGTTATAATCAGACAGCGT 1252901 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||||||||| || ||||| ||||| | || ||| ||||| || ||||| || Sbjct 1252900 GCGACCATCTTCTAGCTGTTTGCCAGCAAAGATCAATCTTTGCTGGTCTGGAGGAATTCC 1252841 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 || || || || ||||| ||| || ||| ||||| || || | || || || || Sbjct 1252840 CTCTTTATCCTGAATCTTAGCCTTAACGTTTTCAATGGTATCAGAAGGCTCAACTTCCAA 1252781 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTTATG 225719 ||||| || ||||| || | || || | || | |||||||| || Sbjct 1252780 GGTGATAGTTTTGCCTGTTAGTGTCTTCACAAAGATCTGCATTTTGTG 1252733 >seq44 Length=1094211 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || | |||||| || ||||| ||||||| |||||| |||| || || | ||||| Sbjct 805553 AGCACCAAGTGGAGGGTTGATTCCTTTTGGATATTGTAGTCGGACAGTGTACGACCATCC 805494 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || | || || ||||| ||||| || |||||||| || || ||||||||||| || ||| Sbjct 805493 TCCAATTGTTTACCAGCAAAGATCAGACGTTGTTGATCTGGGGGAATACCTTCTTTATCT 805434 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || |||||| || ||| ||| || || || |||| ||| || || | ||||| ||| Sbjct 805433 TGAATCTTTGCTTTGACATTTTCAATAGTATCAGAGGGTTCGACCTCAAGAGTGATGGTC 805374 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||||| | || |||| ||| | |||||| Sbjct 805373 TTGCCCGTTAGGGTCTTTACGAAAATTTGCAT 805342 >seq74 Length=797657 Score = 102 bits (112), Expect = 2e-16 Identities = 86/106 (81%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529 ||| ||||| ||||||||||| ||||| ||||| || || || ||||| || |||||||| Sbjct 672588 GAAAATTTGTCCATCAGTAATGGAGATGACATTGGTTGGAATGTAAGCTGATACATCACC 672647 Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCA 4575 ||||| ||||| | ||| || || || ||||| || ||||||||| Sbjct 672648 AGCTTGGGTTTCAATAACCGGCAAAGCCGTTAGGGAGCCACCACCA 672693 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192306670598330