Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq170 140 3e-28 >seq170 Length=322284 Score = 140 bits (154), Expect = 3e-28 Identities = 485/761 (64%), Gaps = 63/761 (8%) Strand=Plus/Minus Query 4380 CGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAATCTC 4439 ||||| || || || || || ||||||| ||| | |||||| || ||||| | | Sbjct 24407 CGGTCTGCGACGAACTCGATGTACTGGCACATCAACATGCAGTTCATCCCAATAAGATTT 24348 Query 4440 ACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTATATCT 4499 |||||||| |||| |||||||| | ||||| || |||| || |||| |||||| || Sbjct 24347 ACAGGTAGGGCGTCGGTCAAAAATTGCTGTTCAATTTTTACTGCCTCTGAGATTATCTCG 24288 Query 4500 TTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCAAAATCA 4559 | ||| ||| | || || | ||| | | | |||| |||||| |||||||| Sbjct 24287 ATAATTCGATCCCTGCTGGGCTTCTGTACAAGATGTTTGAACATTAAACAAGCAAAATCG 24228 Query 4560 CAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAA 4619 ||||| || |||||||| | | || |||||||| ||||| || | || ||||| | Sbjct 24227 CAATGTAAGCCTTCGTCACGGGATATAAGTTCGTTGGAAAAAGTCAGACCAGGCATAATG 24168 Query 4620 CCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACG 4679 || ||||| || ||||| || || | ||||| ||| ||||| || || || || Sbjct 24167 CCCCTCTTCTTGAGCCAGAAAATTGATGCAAAACTGCCACTGAAGAAGATTCCCTCGACT 24108 Query 4680 GCGGCAAACGCTACTAATCGGGACCCGAACG-AGCTGGCTTTGTCTTTA-ATCCATTTTA 4737 || ||||| || | || || ||||| ||||| ||| ||| | ||||| | Sbjct 24107 GCAGCAAAAGCAATTATTCTTTCACCGAAATTAGCTGACTTG--CTTGATATCCAAGCCA 24050 Query 4738 ATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAA-------- 4789 ||||||| ||| || || ||||| || || | || | || ||||| || Sbjct 24049 TGGCCCAGTCAGCCTTCTTTTTAACACAGGGTAAGGTTTCAATTGCGTTGAAGAGGAACT 23990 Query 4790 ------TAATT---TACTTT---TTTCAAATG---------------------------- 4809 ||| | |||| | |||||| || Sbjct 23989 CTCTGATAAATACGTACTATAAATTTCAATTGCACGCAGTAAAACAATATTAACCTAACC 23930 Query 4810 -------GG--TCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATAT 4860 || || | |||||||||||| |||| | || |||||||| || || | || Sbjct 23929 TTTCTTTGGCATCCTTAATATAAGTGTCGATTAAAATACTGTACATTTCCGAGTGGACAT 23870 Query 4861 TTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTAC 4920 ||||||| ||||| || || ||||| || | | |||||| | | ||| || || | | Sbjct 23869 TTTCTATGGCAATTTGGAAGCCGTAGAAAAAGCGAGCTTCCGGGATTTGCACCTCCTGGC 23810 Query 4921 AAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAA 4980 || | || || | ||||| ||||| || ||||| ||| || || || || | | Sbjct 23809 TGAAACGCTCCACGAGATTTTCATTTACAATTCCGTCGGAGGCAGCGAAGAAAGCTAGCA 23750 Query 4981 CATGAGATATAAAGTACTGTTCGTCAGGCTTA-AGTTTTTTCCAGTGGGGCAAATCTTTA 5039 | || || || |||| || || | |||| | ||||| | ||| || | || || || Sbjct 23749 CGTGTGAAATGAAGTGCTTCTC-ACCGGCTGATAGTTTCTCCCAATGCTGTAAGTCATTC 23691 Query 5040 GTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGC 5080 | | | ||||| || || ||||||||||| ||||| || Sbjct 23690 GAAAGGTTTACTTCCTCCACTGTCCAAAACGAGGCTTCAGC 23650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426973117418435