Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq3563 217 1e-51 seq3509 212 5e-50 seq650 98.7 7e-16 >seq3563 Length=1406 Score = 217 bits (240), Expect = 1e-51 Identities = 272/366 (74%), Gaps = 8/366 (2%) Strand=Plus/Minus Query 27064 AAGTCGTCCAGGCTCTCCACCCTCCTGTTTATCCTCAGTGTGGGAAAGGGTCTGGGCTCC 27123 ||||| || | |||||||| |||| || || ||||| | ||||| || || || | Sbjct 403 AAGTCCTCTATATTCTCCACCTTCCTTTTAATGATCAGTTTCGGAAAAGGCCTCGGAACT 344 Query 27124 CTCTCGAGCTGAGTCTT-CAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAG 27182 || | ||||| |||| || |||||| | ||||| ||| || || ||||| ||||| | Sbjct 343 CTTTTAAGCTGC-TCTTGCAACGGTTCAATGTGATTCAGATATACATGAGCATCTCCAAA 285 Query 27183 GGTGTGGACAAACTCTCCCGG-TTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGA 27241 ||| |||||||| ||||| || ||| |||| | |||||||||| | |||||| || || | Sbjct 284 GGTATGGACAAAATCTCCAGGCTTCAAGCCTG-TGACGTGAGCAACCATGTAAGTAAGAA 226 Query 27242 GAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGA 27301 | | |||||||||||||||||| || ||||| || |||||||| | |||||||| |||| Sbjct 225 GGGCGTAGCTGGCGATGTTAAAAGGGACCCCCAGTCCCATGTCGGCAGACCTCTGATAGA 166 Query 27302 GCTGACACGAGAGCTCTCCATCGCTTACGTAAAACTGACATATGGCGTGGCACGGAGGAA 27361 |||| ||||| |||||||| | || || ||||| | | |||||| || |||| Sbjct 165 GCTGGCACGATAGCTCTCCGTTTGCAACATAGAACTGGACGAGGCAGTGGCAAGGCGGAA 106 Query 27362 GAGCCA--TGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTC 27419 |||||| ||||| | ||| |||||||||||| || |||||| || | ||| | Sbjct 105 GAGCCATCTGAGG--GATGTCGACTGGGTTCCAGGCGGTCATGATGATTCGGCGGTCGTT 48 Query 27420 TGGGTT 27425 ||||| Sbjct 47 AGGGTT 42 >seq3509 Length=1415 Score = 212 bits (234), Expect = 5e-50 Identities = 263/353 (75%), Gaps = 8/353 (2%) Strand=Plus/Plus Query 27077 TCTCCACCCTCCTGTTTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAG 27136 |||||||| |||| || || ||||| | ||||| || || || | || | ||||| Sbjct 1026 TCTCCACCTTCCTTTTAATGATCAGTTTCGGAAAAGGCCTCGGAACTCTTTTAAGCTGC- 1084 Query 27137 TCTT-CAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAAC 27195 |||| || |||||| | ||||| ||| || || ||||| ||||| | ||| |||||||| Sbjct 1085 TCTTGCAACGGTTCAATGTGATTCAGATATACATGAGCATCTCCAAAGGTATGGACAAAA 1144 Query 27196 TCTCCCGG-TTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGC 27254 ||||| || ||| |||| | |||||||||| | |||||| || || || | ||||||||| Sbjct 1145 TCTCCAGGCTTCAAGCCTG-TGACGTGAGCAACCATGTAAGTAAGAAGGGCGTAGCTGGC 1203 Query 27255 GATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAG 27314 ||||||||| || ||||| || |||||||| | |||||||| |||||||| ||||| || Sbjct 1204 GATGTTAAAAGGGACCCCCAGTCCCATGTCGGCAGACCTCTGATAGAGCTGGCACGATAG 1263 Query 27315 CTCTCCATCGCTTACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCA--TGAGG 27372 |||||| | || || ||||| | | ||||| || |||||||||| ||||| Sbjct 1264 CTCTCCGTTTGCAACATAGAACTGGACGAGGCAATGGCAAGGCGGAAGAGCCATCTGAGG 1323 Query 27373 CCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTT 27425 | ||| |||||||||||| || |||||| || | ||| | ||||| Sbjct 1324 --GATGTCGACTGGGTTCCAGGCGGTCATGATGATTCGGCGGTCGTTAGGGTT 1374 >seq650 Length=6480 Score = 98.7 bits (108), Expect = 7e-16 Identities = 227/338 (67%), Gaps = 12/338 (4%) Strand=Plus/Plus Query 27349 TGGCACGGAGGAAGAGCCAT--GAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGA 27406 ||||| || ||||||||||| |||| | ||| |||||||||||| || ||||| Sbjct 1 TGGCAAGGCGGAAGAGCCATCTGAGGG--ATGTCGACTGGGTTCCAGGCGGTCATGATGA 58 Query 27407 TGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCC 27466 | || | ||| | ||||| | | ||| | || | || |||||||| | | Sbjct 59 TTCGGCGGTCGTTAGGGTTCGTTTTAATGCGCTCAATCAACCCCTGGAGCTGATCGATTC 118 Query 27467 CCATCCCCGAGTAGTCTACCCTCATG----TCCGTGTACTCTGCTCCGAAATGCCTCCAT 27522 | ||| ||||| || | ||| || |||||||||||||| || |||||||| Sbjct 119 CTTGCCCATCGTAGT-TA---TTATGGCAATCTGTGTACTCTGCTCCAAAGTGCCTCCAC 174 Query 27523 TGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCC 27582 || ||||| || || ||||||| || |||||||| | | |||||| | ||| || Sbjct 175 TGAAACCCATATACTGGTCCCAAATCGCCCTCTTCGCGATTGGTGAAGCCGCACTTATCG 234 Query 27583 AAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTG 27642 | || || | || | ||| |||||||||| | | ||||| || | ||| Sbjct 235 AGGAATTCCCGGGCGCTGTTCCCGTCCCAGATATGAATGTTTTTCTCCTGAAGGGCCTTG 294 Query 27643 GAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTC 27680 | || ||| |||| ||| ||||||||| |||||||| Sbjct 295 GCGTCCGTGCTCCCTTTGATGAACCACAGGAGCTCCTC 332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369441022992545