Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq13 596 2e-165 seq170 123 3e-23 >seq13 Length=2077869 Score = 596 bits (660), Expect = 2e-165 Identities = 1263/1870 (68%), Gaps = 26/1870 (1%) Strand=Plus/Minus Query 76772 CTTATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACC 76831 |||||| | ||||| |||||||| | ||| || ||||| || |||||||||||||| Sbjct 1821406 CTTATCAACAGTAAATTGAATTGGTTGTGCTGCTGGCTTTGTTCGGAGATAGTACATACC 1821347 Query 76832 AGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGG 76891 || || || ||||| |||| || || || || || | || || |||| | || Sbjct 1821346 CGTCTTCAGGCCCAGCTTCCAGCCATAAAAGTGGATCTTCGTTAGCAGTCCATAATTGGG 1821287 Query 76892 ATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGC 76951 || || | |||||||| | ||| ||||||||||| ||||| || || | || || || Sbjct 1821286 CTCTGCAACGTGAATATTGAACGATTGACTTTGATCAATGAAGGCACCACGGTCTGCAGC 1821227 Query 76952 CATTTTTATAATGGTCTTTTGA--GGAATTTCCCAAATAGTTTTGAAAACTTGTTTGA-T 77008 ||| | || | || |||| | | ||||||||||| || || | | | | || | Sbjct 1821226 CATGTGCAT--TTGTGTTTTAACCGAAATTTCCCAAACGGTCTTATAGA-TCATCCGAAT 1821170 Query 77009 ATCATCTGGAAGGTT-TGTATTT--TGAATGGAACCACCATCTGATATAATTGTATTCTT 77065 || || || | || | ||| | |||| |||||| | || | |||||| | ||||| Sbjct 1821169 ATTCTCCGGGATCTTCTCTATGTCCTGAACGGAACCTCTATTGGCTATAATAGCGTTCTT 1821110 Query 77066 TATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTAT 77125 ||||| || | ||| | | | || ||||| | | ||||| | || || | Sbjct 1821109 CATATCTTCGTCCCAAAGATCCAGTTCGGTTAAGTCGGCCAAAAGATGGTGGTTTACGAC 1821050 Query 77126 TTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGA 77185 | |||||| || || | || | |||| |||||| || ||| || || || | || Sbjct 1821049 TATAAATTCACCCGAAAGCACACGACGATGGTAAATGTTCGAGGTGTAGGGCTCAAAGGA 1820990 Query 77186 TTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACT 77245 |||||||| || | |||||| | |||||| || || ||||| || |||| || || Sbjct 1820989 CTCATTGTTGCCAAGAATTTGTGAAGTAGATGCTGTGGGCATCGGCGCCAATAACAAGGA 1820930 Query 77246 ATTTCTGAGACCATG-TGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTG 77304 ||| || | |||| || | | ||||| || || || | ||| ||||| | || | Sbjct 1820929 ATTCCTAACGCCATACTGCTTT-ATTTTCTCCTTAAGCTCCGCCCAGTCCCATAAATTGG 1820871 Query 77305 AAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATTAT 77364 || ||||| | |||||| || || ||||| || || | ||||| | | Sbjct 1820870 TGGGCGTTTTGTCCCACATATCGTACTGGAGTATTCCTTTGCTGACCGGCGATCCCTCGT 1820811 Query 77365 ATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAAT 77424 | ||||| || ||||| | || ||||||||| || || ||||| | |||||||| | Sbjct 1820810 AGGTTTCGTACGGTCCAAATTCTTTAGCTAGTTCGCAGCTGGCTTCAAGGGCTCCGTAGT 1820751 Query 77425 AAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAAT 77484 |||| ||||| ||||||| || ||| | | ||| || || || || | || ||| Sbjct 1820750 AAATAGTTTCAAAAATCTGCTGATTCAATTTTTGAGCCTCCTCGCTTTCGTAGGGGTAAC 1820691 Query 77485 GTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCT 77544 | | ||||| || | ||| || | || || || || || ||||| || | || || Sbjct 1820690 GCATCAGAATGAATGTATCAGCCATGCCTTGCACACCTATGCCAATCGGGCGGTGCTTCA 1820631 Query 77545 TATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGAT 77604 | ||||| | ||||||||||| || ||||| || ||||| || ||||| || || |||| Sbjct 1820630 TGTTGGACTTCTTAGCTTCTGGCATCGGATAGTAGTTAATATCGATAATCTTGTTTAGAT 1820571 Query 77605 TTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAA----TCTTCCATCT 77660 | || ||| |||| || |||| | ||| | || ||| | | |||| | Sbjct 1820570 TCCTCGTCACTGTTTTAGTAACTGCCTTCAATTTCTGGAAGTCATACTTCTTTTCCGGCG 1820511 Query 77661 ATAACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGCGTTG 77720 | || ||||||||||| || ||||| || | |||||| || |||| || | ||| Sbjct 1820510 -TGACGAACATGTTCAACGCAATAGAGGCCAAATTACATACGGCTATTTCGTCGGCGGCC 1820452 Query 77721 GCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGG 77780 | || | || || || || |||||||| |||||||| ||||| || | ||| || ||| Sbjct 1820451 GAGTACTCTACAATTTCTGTGCATAGATTGCTACATTTAATAGTCCCGATATTCTGCTGG 1820392 Query 77781 TTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGT 77840 || |||||| | ||||||| |||||| || | ||| | ||||| || || || | ||| Sbjct 1820391 TTACTCTTTCTGTTGCATGCGTCCTTGTATAACATATAAGGAGTTCCTGTCTCTACCTGA 1820332 Query 77841 GATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATCATAGATTTGTATCGCCTCTCT 77900 ||||| || |||| ||| | || || || | | | ||| |||| ||| Sbjct 1820331 GATTCAATTATAGCAAACCACAGCTGCCTGGCCTTCACCTTCCTGTTGGCACGCCCCTCG 1820272 Query 77901 CTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGG 77960 | || |||| || |||||| ||| |||| ||| ||||| || ||| | |||| Sbjct 1820271 TTCTCGTATTTTGTGTATAGCTCTTCGAATTTATCACCCCACACCTCAAAGAGGTCAGGA 1820212 Query 77961 CATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGA 78020 |||| |||||| |||||||| |||||||| ||||| ||| || | |||||||||||| Sbjct 1820211 CATTTATTTGGACACATCAAAGACCAGTCTTCATCTGCCTCGACCCTCTTCATAAAGAGA 1820152 Query 78021 TCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTC 78080 || || ||||| || || ||||| || || | | || ||||| || || ||| Sbjct 1820151 TCCGGAATCCAGAGTGCGTAAAATAAGTCGCGAGCACGGTGCTCTTCTGCGCCAGTGTTC 1820092 Query 78081 TTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATA 78140 || || || | |||||||| | | ||| | |||||| || || | || || || | Sbjct 1820091 TTCTTCAGGTTCAGAAACTCAAAGACATCTGCATGCCAGGGCTCCAAGTAAATAGCGAAG 1820032 Query 78141 ACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTC 78200 | || || |||||||| |||||||| || | ||| | || ||| ||| | || ||| Sbjct 1820031 GCCCCGGGACGTTTATTTCCTCCCTGGTCAACATACTTTGCAACGTTGTTAAACACCCTC 1819972 Query 78201 AACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCG 78260 ||||| |||| | ||| |||||| | |||||||| |||| ||| | |||| | || Sbjct 1819971 AACATGGGAACGAGACCATTAGATATGCCATTTGTGCCAGCTATAGCAGTTCCCTTCGCT 1819912 Query 78261 CGAATATTACTAATGGA----TATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCA 78316 || ||| |||||| || || ||||||||||| |||| || || | |||||| Sbjct 1819911 CGGATAC----AATGGACGTTTAAGCCGATTCCTCCTGCGTTCTTCGAGATCATAGCGCA 1819856 Query 78317 ACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACA 78376 || | || | | | |||| ||||| || || || | |||| | | |||||||| Sbjct 1819855 GCGCTCCACAGACTTGAAGATTCCCTCAATTGAATCCTCGACCATGGTCAATAGAAAACA 1819796 Query 78377 GCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAA 78436 || | ||| || || || | || || ||||| || |||||||| || || Sbjct 1819795 CGAGGAGAGTTGTGGACGACGTGTCGCAGCTGCGAACAATGTTGGGGATGCATGAGTGAA 1819736 Query 78437 CCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTC-CCATTGATGAA 78495 ||||||| ||||| || ||||| ||||| || || | || || || || | |||| Sbjct 1819735 ATATTTTTCCGAAAGGAGGTTGTACGTTTCGATTGCGGCATCGATATCTTCACCG-TGAA 1819677 Query 78496 TTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTT 78555 |||| || | || | ||||||||| |||||||||| ||| | | ||| ||| |||| Sbjct 1819676 TTCCGACTGAAACTCTCATCAACATGTGCTGAGGTCGTTCGGCGATTTTACCATTGATTT 1819617 Query 78556 TCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCT 78615 | || | || || |||| | ||||||||| || || |||||||| ||||| | | Sbjct 1819616 TTAAAAGATAGGACCTTTCGAGAGTTTTAAAGCCGAAGTAGTTGTAATTGAAGTCGCGGT 1819557 Query 78616 CGTAAATAAT 78625 |||||||||| Sbjct 1819556 CGTAAATAAT 1819547 >seq170 Length=322284 Score = 123 bits (136), Expect = 3e-23 Identities = 263/382 (69%), Gaps = 13/382 (3%) Strand=Plus/Minus Query 48012 CAATTCATTCCTATAAGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTG 48071 || ||||| || ||||| || || ||||| || || || | ||| | ||||| || | Sbjct 24368 CAGTTCATCCCAATAAGATTTACAGGTAGGGCGTCGGTCAAAAATTGCTGTTCAATTTTT 24309 Query 48072 ACAGCATCCACTATTATC--GATGTTACCGTTTCCTCACTTGG--TGGATACAACAAATG 48127 || || || |||||| ||| | | | | ||| || || | ||||| | || Sbjct 24308 ACTGCCTCTGAGATTATCTCGATAATTC-GATCCCTG-CTGGGCTTCTGTACAAGA--TG 24253 Query 48128 TTTAAACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTT 48187 ||| ||||||||||| |||||||| ||||| | ||||| || | || | |||||| Sbjct 24252 TTTGAACATTAAACAAGCAAAATCGCAATGTAAGCCTTCGTCACGGGATATAAGTTCGTT 24193 Query 48188 AGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGA 48247 ||||| || ||||| ||||| | || | || |||||||| || |||| || ||| Sbjct 24192 GGAAAAAGTCAGACCAGGCATAATGCCCCTCTTCTTGAGCCAGAAAATTGATGCAAAACT 24133 Query 48248 TCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGC 48307 ||| ||||| || || || || || ||||| || | | ||| || ||| || | || Sbjct 24132 GCCACTGAAGAAGATTCCCTCGACTGCAGCAAAAGCAATTATTCTTTCACCGAAATTAGC 24073 Query 48308 TTCGTTG--TG-TATCC-ACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTG 48363 | ||| || ||||| | | || ||||| ||||||||||| || ||||| || | | Sbjct 24072 TGACTTGCTTGATATCCAAGCCATG-GCCCAGTCAGCCTTCTTTTTAACACAGGGTAAGG 24014 Query 48364 TTTCTATAGCATTAAAGAGAAA 48385 |||| || || || ||||| || Sbjct 24013 TTTCAATTGCGTTGAAGAGGAA 23992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694541198024800