Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq13 569 3e-157 seq170 123 4e-23 >seq13 Length=2077869 Score = 569 bits (630), Expect = 3e-157 Identities = 1257/1870 (67%), Gaps = 26/1870 (1%) Strand=Plus/Minus Query 75367 CTTATCCAACGTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACC 75426 |||||| | || || ||||| || | |||||| ||||| || |||||||||||||| Sbjct 1821406 CTTATCAACAGTAAATTGAATTGGTTGTGCTGCTGGCTTTGTTCGGAGATAGTACATACC 1821347 Query 75427 AGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGG 75486 || || || ||||| |||| || || || || || | ||||| |||| | || Sbjct 1821346 CGTCTTCAGGCCCAGCTTCCAGCCATAAAAGTGGATCTTCGTTAGCAGTCCATAATTGGG 1821287 Query 75487 ATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGC 75546 || || | |||||||| | ||| ||||||||||| ||||| || || | || || || Sbjct 1821286 CTCTGCAACGTGAATATTGAACGATTGACTTTGATCAATGAAGGCACCACGGTCTGCAGC 1821227 Query 75547 CATTTTTATAATGGTCTTTTGA--GGAATTTCCCAAATAGTTTTGAAAACTTGTTTGA-T 75603 ||| | || | || |||| | | ||||||||||| || || | | | | || | Sbjct 1821226 CATGTGCAT--TTGTGTTTTAACCGAAATTTCCCAAACGGTCTTATAGA-TCATCCGAAT 1821170 Query 75604 ATCATCTGGAAGATT-TGTATTT--TGAATGGATCCGCCATCAGATATAATTGTATTCTT 75660 || || || | || | ||| | |||| ||| || | || | |||||| | ||||| Sbjct 1821169 ATTCTCCGGGATCTTCTCTATGTCCTGAACGGAACCTCTATTGGCTATAATAGCGTTCTT 1821110 Query 75661 GATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAAT 75720 || || || | ||| | | |||||||| | | ||||| | || || | Sbjct 1821109 CATATCTTCGTCCCAAAGATCCAGTTCGGTTAAGTCGGCCAAAAGATGGTGGTTTACGAC 1821050 Query 75721 TTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGA 75780 | |||||| || || | || | ||| |||||| || ||| || || || | || Sbjct 1821049 TATAAATTCACCCGAAAGCACACGACGATGGTAAATGTTCGAGGTGTAGGGCTCAAAGGA 1820990 Query 75781 TTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACT 75840 |||||||| || | |||||| | ||| || || || ||||| || |||| || || Sbjct 1820989 CTCATTGTTGCCAAGAATTTGTGAAGTAGATGCTGTGGGCATCGGCGCCAATAACAAGGA 1820930 Query 75841 ATTTCTGAGACCATG-TGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTG 75899 ||| || | |||| || | | ||||| || || || | ||| ||||| | || | Sbjct 1820929 ATTCCTAACGCCATACTGCTTT-ATTTTCTCCTTAAGCTCCGCCCAGTCCCATAAATTGG 1820871 Query 75900 ATGGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCATTAT 75959 || ||||| | |||||| || || ||||| ||||| | ||||| | | Sbjct 1820870 TGGGCGTTTTGTCCCACATATCGTACTGGAGTATTCCTTTGCTGACCGGCGATCCCTCGT 1820811 Query 75960 ATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAAT 76019 | |||||||| | || | || |||||||||||| || || || | || ||||| | Sbjct 1820810 AGGTTTCGTACGGTCCAAATTCTTTAGCTAGTTCGCAGCTGGCTTCAAGGGCTCCGTAGT 1820751 Query 76020 AAATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAAT 76079 |||| ||||| ||||||| || ||| | | ||| || || || || | || ||| Sbjct 1820750 AAATAGTTTCAAAAATCTGCTGATTCAATTTTTGAGCCTCCTCGCTTTCGTAGGGGTAAC 1820691 Query 76080 GTAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCT 76139 | | ||||| |||| ||| || | || || || || || ||||| || | || || Sbjct 1820690 GCATCAGAATGAATGTATCAGCCATGCCTTGCACACCTATGCCAATCGGGCGGTGCTTCA 1820631 Query 76140 TATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGAT 76199 | ||||| | | ||||||||| || || || || |||||||| ||||| || || |||| Sbjct 1820630 TGTTGGACTTCTTAGCTTCTGGCATCGGATAGTAGTTAATATCGATAATCTTGTTTAGAT 1820571 Query 76200 TTCTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAA----TTTTCCATCT 76255 | || ||| |||| || |||| | ||| | || ||| | |||||| | Sbjct 1820570 TCCTCGTCACTGTTTTAGTAACTGCCTTCAATTTCTGGAAGTCATACTTCTTTTCCGGCG 1820511 Query 76256 ATCACAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTG 76315 | || ||||| || | || ||||| || | |||||| ||||||| || | || Sbjct 1820510 -TGACGAACATGTTCAACGCAATAGAGGCCAAATTACATACGGCTATTTCGTCGGCGGCC 1820452 Query 76316 GCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGG 76375 | || | || || || ||||||||||| ||||| || ||||| || | ||| || ||| Sbjct 1820451 GAGTACTCTACAATTTCTGTGCATAGATTGCTACATTTAATAGTCCCGATATTCTGCTGG 1820392 Query 76376 TTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGT 76435 || |||||| |||| |||| |||||| || | | | | |||||||| || || | ||| Sbjct 1820391 TTACTCTTTCTGTTGCATGCGTCCTTGTATAACATATAAGGAGTTCCTGTCTCTACCTGA 1820332 Query 76436 GATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATTATAGATTTGTATCGCTTCTCT 76495 ||||| || |||| ||| | || || || | | ||| ||| ||| Sbjct 1820331 GATTCAATTATAGCAAACCACAGCTGCCTGGCCTTCACCTTCCTGTTGGCACGCCCCTCG 1820272 Query 76496 CTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGA 76555 | || |||| ||| |||| | ||| |||| ||| ||||| || ||| | ||||| Sbjct 1820271 TTCTCGTATTTTGTGTATAGCTCTTCGAATTTATCACCCCACACCTCAAAGAGGTCAGGA 1820212 Query 76556 CATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGA 76615 |||| ||| ||||||||||| ||||| || ||||| ||| |||| |||||||||||| Sbjct 1820211 CATTTATTTGGACACATCAAAGACCAGTCTTCATCTGCCTCGACCCTCTTCATAAAGAGA 1820152 Query 76616 TCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTC 76675 || || ||||| || || ||||| || || | | | ||||| || || ||| Sbjct 1820151 TCCGGAATCCAGAGTGCGTAAAATAAGTCGCGAGCACGGTGCTCTTCTGCGCCAGTGTTC 1820092 Query 76676 TTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATA 76735 || || || | || ||||| | | ||| | |||||| || || | || || || | Sbjct 1820091 TTCTTCAGGTTCAGAAACTCAAAGACATCTGCATGCCAGGGCTCCAAGTAAATAGCGAAG 1820032 Query 76736 ACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTC 76795 | || || |||||||| |||||||| || | ||| | ||| ||| ||| | || ||| Sbjct 1820031 GCCCCGGGACGTTTATTTCCTCCCTGGTCAACATACTTTGCAACGTTGTTAAACACCCTC 1819972 Query 76796 AACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCA 76855 ||||| |||| | || |||||| | |||||||| |||| ||| | |||| || Sbjct 1819971 AACATGGGAACGAGACCATTAGATATGCCATTTGTGCCAGCTATAGCAGTTCCCTTCGCT 1819912 Query 76856 CGAATATTACTAATAGA----TAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACA 76911 || ||| ||| || || ||| ||||||||||| | || ||||| | ||| || Sbjct 1819911 CGGATA----CAATGGACGTTTAAGCCGATTCCTCCTGCGTTCTTCGAGATCATAGCGCA 1819856 Query 76912 GCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACA 76971 ||| | || | | |||| ||||| || ||| || | |||| | | |||||||| Sbjct 1819855 GCGCTCCACAGACTTGAAGATTCCCTCAATTGAATCCTCGACCATGGTCAATAGAAAACA 1819796 Query 76972 GCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAA 77031 || | ||| || || || | || |||||||| || |||||||||||||| Sbjct 1819795 CGAGGAGAGTTGTGGACGACGTGTCGCAGCTGCGAACAATGTTGGGGATGCATGAGTGAA 1819736 Query 77032 CCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATC-CCATTGATGAA 77090 ||||||| ||||| || ||||| ||||| || | || || ||||| || | |||| Sbjct 1819735 ATATTTTTCCGAAAGGAGGTTGTACGTTTCGATTGCGGCATCGATATCTTCACCG-TGAA 1819677 Query 77091 TTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTT 77150 |||| || | || | ||||||||| |||||||||||||| | | ||| ||| |||| Sbjct 1819676 TTCCGACTGAAACTCTCATCAACATGTGCTGAGGTCGTTCGGCGATTTTACCATTGATTT 1819617 Query 77151 TCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTT 77210 | || | || || |||| | ||||||||| || || |||||||| ||||| | | Sbjct 1819616 TTAAAAGATAGGACCTTTCGAGAGTTTTAAAGCCGAAGTAGTTGTAATTGAAGTCGCGGT 1819557 Query 77211 CGTAAATAAT 77220 |||||||||| Sbjct 1819556 CGTAAATAAT 1819547 >seq170 Length=322284 Score = 123 bits (136), Expect = 4e-23 Identities = 282/416 (68%), Gaps = 9/416 (2%) Strand=Plus/Minus Query 46465 TCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGTTTGACC 46524 ||||| ||||| || || ||| ||||| || ||||| || || || || || Sbjct 24404 TCTGCGACGAACTCGATGTACTGGCACATCAACATGCAGTTCATCCCAATAAGATTTACA 24345 Query 46525 GGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTATC--GATG 46582 ||||| || || || | ||| | |||||||| | || || || || |||||| ||| Sbjct 24344 GGTAGGGCGTCGGTCAAAAATTGCTGTTCAATTTTTACTGCCTCTGAGATTATCTCGATA 24285 Query 46583 TTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAAAATCAC 46642 | | | | ||| || || || | | |||||| ||||||||||| |||||||| | Sbjct 24284 ATTC-GATCCCTG-CTGGGCTTCTGTACAAGATGTTTGAACATTAAACAAGCAAAATCGC 24227 Query 46643 AATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTC 46702 |||| | |||||| || | || | |||||| ||||| || || |||||||| | | Sbjct 24226 AATGTAAGCCTTCGTCACGGGATATAAGTTCGTTGGAAAAAGTCAGACCAGGCATAATGC 24167 Query 46703 CACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAG 46762 | | ||| |||||||| || || | || ||| ||| ||||| || || || || | Sbjct 24166 CCCTCTTCTTGAGCCAGAAAATTGATGCAAAACTGCCACTGAAGAAGATTCCCTCGACTG 24107 Query 46763 CCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATT--ATGA-ATCC-ACCTTTGA 46818 | || || || | | ||| || ||| || | || || ||| |||| | | || Sbjct 24106 CAGCAAAAGCAATTATTCTTTCACCGAAATTAGCTGACTTGCTTGATATCCAAGCCATG- 24048 Query 46819 GCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAA 46874 ||||| |||||||| || || ||||| || | ||||| || || || ||||| || Sbjct 24047 GCCCAGTCAGCCTTCTTTTTAACACAGGGTAAGGTTTCAATTGCGTTGAAGAGGAA 23992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712803442862400