Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_031224.1 Length=59443 Score E Sequences producing significant alignments: (Bits) Value seq3509 84.2 8e-12 seq3563 82.4 3e-11 >seq3509 Length=1415 Score = 84.2 bits (92), Expect = 8e-12 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 52122 CCCTGCCATACACTATTCCAATTCTATGTAGCTGAAGGTAAGCTTTCGTGCCATTTGTAT 52181 || |||||| || |||| |||||||| || | || |||| |||||||| | ||| Sbjct 1305 CCTTGCCATTGCCTCGTCCAGTTCTATGTTGCAAACGGAGAGCTATCGTGCCAGCTCTAT 1246 Query 52182 CAGCGGTCTGCCGACATGTTCTTGGGCGTTCCGTTTAACATTGCCAGCTATTCCTTGCTG 52241 ||| |||||||||||||| |||| || || |||||||| |||||||| || | || Sbjct 1245 CAGAGGTCTGCCGACATGGGACTGGGGGTCCCTTTTAACATCGCCAGCTACGCCCTTCTT 1186 Query 52242 ACGCATCTGATTGCTC 52257 || | || |||||| Sbjct 1185 ACTTACATGGTTGCTC 1170 >seq3563 Length=1406 Score = 82.4 bits (90), Expect = 3e-11 Identities = 90/120 (75%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 52138 TCCAATTCTATGTAGCTGAAGGTAAGCTTTCGTGCCATTTGTATCAGCGGTCTGCCGACA 52197 |||| |||||||| || | || |||| |||||||| | |||||| |||||||||||| Sbjct 127 TCCAGTTCTATGTTGCAAACGGAGAGCTATCGTGCCAGCTCTATCAGAGGTCTGCCGACA 186 Query 52198 TGTTCTTGGGCGTTCCGTTTAACATTGCCAGCTATTCCTTGCTGACGCATCTGATTGCTC 52257 || |||| || || |||||||| |||||||| || | || || | || |||||| Sbjct 187 TGGGACTGGGGGTCCCTTTTAACATCGCCAGCTACGCCCTTCTTACTTACATGGTTGCTC 246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190062827653950