Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq10 145 2e-29 seq39 116 9e-21 >seq10 Length=2329298 Score = 145 bits (160), Expect = 2e-29 Identities = 160/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || ||||| ||||| ||||| ||||||||||||||||||| ||||| | ||||| Sbjct 1254090 AGAACCAGATGGAGAGTTGACTCCTTTTGGATGTTGTAATCGGACAAAGTGCGACCATCC 1254031 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 |||| ||| ||||| ||||| || | ||||| |||| | ||| || ||||| ||| Sbjct 1254030 TCTAATTGTTTACCGGCAAAGATGAGTCGTTGCTGATCCGGTGGGATACCCTCCTTATCT 1253971 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || ||| ||| |||| | | | || || ||| ||||| ||||| |||||| Sbjct 1253970 TGGATCTTAGCTTTAACATTCTCAATGGTATCGGATGGCTCGACTTCCAGAGTGATAGTT 1253911 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 ||||| || | ||||| || |||| ||||||| Sbjct 1253910 TTGCCAGTCAATGTCTTTACAAAGATCTGCATT 1253878 Score = 116 bits (128), Expect = 9e-21 Identities = 157/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 ||||| ||||||||||| | || ||||| || |||||||| ||||||| | ||| | Sbjct 1255236 AGTCTAAGGACAAGATGCAAGGTTGACTCCTTCTGGATGTTATAATCGGACAGAGTGCGG 1255177 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 ||||| || || ||| ||||| || || | | ||||| || | | ||||||||| Sbjct 1255176 CCATCCTCGAGTTGTTTACCGGCAAAAATCAAACGTTGCTGATCTGGAGGAATTCCTTCC 1255117 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || || || ||||| |||||| | || | | | || ||| || ||||| | ||| Sbjct 1255116 TTATCCTGGATTTTAGCCTTGACATTTTCAATGGTATCAGAAGGTTCAACTTCCAAAGTG 1255057 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || ||||| ||||| | |||||||| || | ||||||| Sbjct 1255056 ATCGTTTTACCCGTCAAGGTCTTCACAAAAATCTGCATT 1255018 Score = 114 bits (126), Expect = 3e-20 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 ||| || ||||||||||| ||||||||||||||||| |||||||||| | || | || Sbjct 1253182 TCTCAGCACAAGATGAAGGGTAGACTCTTTTTGGATATTGTAATCGGAGAGTGTACGACC 1253123 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 ||| || | ||| || || |||||||| | ||| || || | | || || || || Sbjct 1253122 ATCCTCCAACTGTTTTCCAGCAAAGATAAGACGCTGTTGATCTGGTGGAATGCCCTCTTT 1253063 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 ||||||||||| ||| ||| |||| | | || || || ||||| | || || Sbjct 1253062 GTCTTGAATTTTAGCTTTCACATTCTCAATTGTATCAGAGGGTTCAACTTCCAAGGTGAT 1253003 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||| || ||||| |||||||| | ||||| Sbjct 1253002 CGTCTTGCCAGTAAGAGTTTTCACGAAAATTTGCAT 1252967 Score = 113 bits (124), Expect = 1e-19 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| | ||| || || ||||| ||||| ||||| ||||| | | || | |||||| Sbjct 1252950 AGGACCAAATGTAGGGTCGACTCCTTTTGAATGTTATAATCAGACAGCGTGCGACCATCT 1252891 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 ||||| ||| || || ||||| | || |||||||| | | ||||| || || || Sbjct 1252890 TCTAGCTGTTTGCCAGCAAAGATCAATCTTTGCTGGTCTGGAGGAATTCCCTCTTTATCC 1252831 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||| || || || | || | | | || ||| ||| ||||| | || |||||| Sbjct 1252830 TGAATCTTAGCCTTAACGTTTTCAATGGTATCAGAAGGCTCAACTTCCAAGGTGATAGTT 1252771 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 ||||| || || |||||||| |||| ||||||||| Sbjct 1252770 TTGCCTGTTAGTGTCTTCACAAAGATCTGCATTTT 1252736 Score = 105 bits (116), Expect = 2e-17 Identities = 157/221 (71%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 |||| |||||| | || |||||||| || ||||| || |||||||| | | || | Sbjct 1254324 AGTCGGAGGACCAAGTGGAGAGTAGATTCCTTTTGAATATTGTAATCAGAAAGTGTGCGT 1254265 Query 151947 CCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTT 152004 |||||||| | ||||| || || |||||||| | ||||| || | | ||||||| Sbjct 1254264 CCATCTTCCAATTGCTTT--CCAGCAAAGATAAGACGTTGCTGATCTGGGGGAATTCCTT 1254207 Query 152005 CCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAG 152064 |||| || |||||||| || ||| | || | | | || || || ||||| | | Sbjct 1254206 CCTTATCCTGAATTTTAGCCTTAACATTTTCGATGGTATCGGATGGTTCGACTTCCAATG 1254147 Query 152065 TAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 | || ||||| || || | ||| |||||||||| ||||||| Sbjct 1254146 TTATCGTTTTACCAGTCAAAGTTTTCACGAAGATCTGCATT 1254106 Score = 102 bits (112), Expect = 2e-16 Identities = 148/208 (71%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || || || ||||| || || || || ||||| | ||| || | ||||| || | Sbjct 1253629 CAAG-TGGAGGGTGGACTCCTTCTGAATATTATAATCAGATAAGGTACGGCCATCCTCCA 1253571 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 |||||| || ||||| || | ||||| || | | ||||||||||| ||||||| Sbjct 1253570 ATTGTTTCCCAGCAAAGATGAGTCGTTGCTGATCTGGAGGAATTCCTTCCTTATCTTGAA 1253511 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | ||| || ||| | || | |||| ||| || ||||| | || || ||||||| Sbjct 1253510 TCTTTGCCTTCACATTTTCAATAGTGTCAGAAGGTTCAACTTCCAATGTGATCGTTTTGC 1253451 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || ||||| |||||||| | |||||| Sbjct 1253450 CAGTAAGAGTTTTCACGAAAATCTGCAT 1253423 Score = 102 bits (112), Expect = 2e-16 Identities = 154/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || |||||||| || ||||| ||||||||||||||||||| ||||| | |||||| Sbjct 1253862 AGAACTAGATGAAGTGTTGACTCCTTTTGGATGTTGTAATCGGACAAAGTGCGACCATCT 1253803 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || | || ||||| ||||| | | ||||| || | | || ||||| || || Sbjct 1253802 TCCAACTGCTTACCGGCAAAGATCAATCGTTGCTGATCTGGTGGAATACCTTCTTTGTCC 1253743 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || ||||| || ||| |||| | | ||||| || || || | ||||| || Sbjct 1253742 TGGATTTTAGCCTTAACATTCTCGATCGTATCTGATGGTTCAACCTCCAATGTAATTGTC 1253683 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACCC 152111 || || || | |||||| ||||| | ||||||| |||| Sbjct 1253682 TTACCGGTCAAAGTCTTAACGAAAATCTGCATTCCACCC 1253644 Score = 89.7 bits (98), Expect = 1e-12 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || | ||| ||||| || || || |||||||| || |||| ||||| | || ||| Sbjct 1255002 AGTACCAAATGGAGAGTGGATTCCTTCTGGATGTTATAGTCGGACAAAGTGCGACCGTCT 1254943 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || | || || || |||||||| | || || || | | || ||||| || || Sbjct 1254942 TCCAATTGCTTACCAGCAAAGATAAGACGTTGTTGATCTGGAGGAATCCCTTCTTTGTCC 1254883 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||| || || || |||| | ||||||| || || || | ||| |||||| Sbjct 1254882 TGAATCTTGGCCTTAACGTTCTCAATTGTGTCTGACGGTTCAACCTCCAAAGTGATAGTT 1254823 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || | |||||||||||||| ||||| Sbjct 1254822 TTGCCGGTTAAAGTCTTCACGAAGATTTGCAT 1254791 Score = 87.8 bits (96), Expect = 4e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 ||||| || || | || ||||| ||||| || || ||||| || |||| | || | Sbjct 1254780 AGTCTCAGTACCAAGTGGAGAGTGGACTCCTTCTGAATGTTATAGTCGGAAAGTGTGCGT 1254721 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 || ||||| | || || || || || | ||||||||||| | | ||| |||||| Sbjct 1254720 CCGTCTTCCAATTGCTTGCCAGCAAAAATTAATCTCTGCTGGTCTGGGGGGATGCCTTCC 1254661 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || || ||||| || || ||| | || | |||| ||| || ||||| | |||| Sbjct 1254660 TTATCCTGAATCTTAGCCTTCACATTTTCAATAGTGTCAGAAGGTTCAACTTCCAAAGTA 1254601 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || |||||||| || | ||||| || || | |||||| Sbjct 1254600 ATCGTTTTGCCAGTCAACGTCTTAACAAAAATCTGCAT 1254563 >seq39 Length=1160777 Score = 116 bits (128), Expect = 9e-21 Identities = 159/222 (72%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || | || || |||||||| || |||||||||||||||| | || | Sbjct 535141 GAGACGGAGCACCAAGTGCAGGGTAGACTCCTTCTGGATGTTGTAATCGGAAAGTGTGCG 535082 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||| || || ||| |||||||| || || | ||| || || | | |||||| || Sbjct 535081 ACCATCCTCAAGCTGTTTACCGGCGAAAATCAGACGCTGTTGATCTGGGGGGATTCCCTC 535022 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || || ||||||| | || | ||||||| ||| || |||||||| Sbjct 535021 CTTGTCCTGGATCTTCGCTTTGACATTTTCAATAGTGTCTGAGGGCTCGACCTCAAGAGT 534962 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || || || || || || || || ||||||| |||||| || Sbjct 534961 GATGGTCTTACCGGTTAGGGTTTTTACGAAGATCTGCATGTT 534920 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153603558980345