Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_031761.1 Length=131855 Score E Sequences producing significant alignments: (Bits) Value seq10 107 2e-18 seq44 104 2e-17 >seq10 Length=2329298 Score = 107 bits (118), Expect = 2e-18 Identities = 154/215 (72%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 ||||||||||| || ||||| | || ||||| || || ||| ||||| |||||| Sbjct 1252967 ATGCAAATTTTCGTGAAAACTCTTACTGGCAAGACGATCACCTTGGAAGTTGAACCCTCT 1253026 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 ||| | ||| | || ||| |||||| |||||||| ||| |||| |||||| Sbjct 1253027 GATACAATTGAGAATGTGAAAGCTAAAATTCAAGACAAAGAGGGCATTCCACCAGATCAA 1253086 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGAT--TCTAAAACTATGGCCGATTATA 111277 || | ||||| | ||| || ||||| ||||| ||| || | ||| | ||||||| | Sbjct 1253087 CAGCGTCTTATCTTTGCTGGAAAACAGTTGGAGGATGGTCGTACACTCT--CCGATTACA 1253144 Query 111278 ATATACAAAAAGAATCTACACTACATTTAGTGTTG 111312 |||| |||||||| ||||| || ||| | ||| || Sbjct 1253145 ATATCCAAAAAGAGTCTACCCTTCATCTTGTGCTG 1253179 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 |||||||||||||| || || || || || || ||||| ||| ||||| || ||| Sbjct 1254335 ATGCAAATTTTTGTAAAGACTTTAACTGGGAAGACCATCACCTTGGAAGTCGAGCCCTCT 1254394 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 || || ||| | ||||| || ||| |||||||||||| |||| ||||| Sbjct 1254395 GACACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAAGAAGGCATTCCACCAGATCAG 1254454 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGAT--TCTAAAACTATGGCCGATTATA 111277 ||| | | |||| ||| || ||||||||||| ||| | | | ||| | || || | Sbjct 1254455 CAACGTTTGATTTTTGCTGGTAAACAATTGGAGGATGGGCGCACATTAT--CTGACTACA 1254512 Query 111278 ATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 |||| || ||||| || || || || || ||| | || ||||| || || Sbjct 1254513 ATATCCAGAAAGAGTCGACCCTTCACTTGGTGCTTCGCCTGCGAGGAGG 1254561 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 111099 AATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111158 |||||| ||||| || || || |||||||| || || ||||| |||| ||||| Sbjct 1253650 AATGCAGATTTTCGTTAAGACTTTGACCGGTAAGACAATTACATTGGAGGTTGAACCATC 1253709 Query 111159 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111218 ||| | | | | || || ||||| ||||||||||| |||| ||||| Sbjct 1253710 AGATACGATCGAGAATGTTAAGGCTAAAATCCAGGACAAAGAAGGTATTCCACCAGATCA 1253769 Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111278 ||| | | || | ||| || || || ||||||||| | ||| || ||||||| || Sbjct 1253770 GCAACGATTGATCTTTGCCGGTAAGCAGTTGGAAGATGGTCGCACTTTGTCCGATTACAA 1253829 Query 111279 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 || ||||| || || ||||| ||| |||| ||||||| || ||||| Sbjct 1253830 CATCCAAAAGGAGTCAACACTTCATCTAGTTCTGCGTCTACGTGGTGG 1253877 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 |||||||| || || || || || ||||||||||| || || |||| ||||| Sbjct 1254791 ATGCAAATCTTCGTGAAGACTTTAACCGGCAAAACTATCACTTTGGAGGTTGAACCGTCA 1254850 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 || | ||| | || || || ||| ||||||||||| |||| |||||| Sbjct 1254851 GACACAATTGAGAACGTTAAGGCCAAGATTCAGGACAAAGAAGGGATTCCTCCAGATCAA 1254910 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 ||| | ||||| | ||| || || ||||||||||| | ||| || |||| ||||| Sbjct 1254911 CAACGTCTTATCTTTGCTGGTAAGCAATTGGAAGACGGTCGCACTTTGTCCGACTATAAC 1254970 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 || || || ||||| || || ||||| || | || || || ||||| Sbjct 1254971 ATCCAGAAGGAATCCACTCTCCATTTGGTACTTCGCCTCCGTGGTGG 1255017 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 ||||| |||||||| ||||| |||| || ||||| ||||| | ||| || || Sbjct 1253195 ATGCAGATTTTTGTAAAAACACTGACTGGGAAAACAATTACATTAGAAGTTGAGCCTTCT 1253254 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 ||| | ||| | || ||| ||||| || |||||||| |||| |||||| Sbjct 1253255 GATACAATTGAAAATGTGAAAGCCAAAATCCAAGATAAAGAAGGTATTCCTCCAGATCAA 1253314 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 || | | |||| ||| || ||||| | || ||| | ||| | |||| ||||| Sbjct 1253315 CAGCGTTTGATTTTTGCTGGTAAACAGCTTGAGGATGGTCGTACTCTCTCCGACTATAAC 1253374 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 || || || ||||| || ||||||||||| | ||||| ||||| || Sbjct 1253375 ATTCAGAAGGAATCCACTCTACATTTAGTTCTACGTCTTCGCGGAGG 1253421 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/230 (69%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 111099 AATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111158 |||||| || || || ||||| ||||| || ||||| || || ||||| ||||| Sbjct 1254106 AATGCAGATCTTCGTGAAAACTTTGACTGGTAAAACGATAACATTGGAAGTCGAACCATC 1254165 Query 111159 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111218 |||| | | | | || || |||||| || || ||||| ||||| ||||| Sbjct 1254166 CGATACCATCGAAAATGTTAAGGCTAAAATTCAGGATAAGGAAGGAATTCCCCCAGATCA 1254225 Query 111219 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGAT--TCTAAAACTATGGCCGATTAT 111276 ||| | ||||| | ||| || || |||||||||||| | | ||| | | ||||| Sbjct 1254226 GCAACGTCTTATCTTTGCTGGAAAGCAATTGGAAGATGGACGCACACTTT--CTGATTAC 1254283 Query 111277 AATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 ||||| ||||| |||||||| || || || || | || || || || || Sbjct 1254284 AATATTCAAAAGGAATCTACTCTCCACTTGGTCCTCCGACTTCGTGGAGG 1254333 >seq44 Length=1094211 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 ||||||||||| || || || | || ||||| ||||| || | || |||||| Sbjct 805342 ATGCAAATTTTCGTAAAGACCCTAACGGGCAAGACCATCACTCTTGAGGTCGAACCCTCT 805401 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 ||| || ||| | || ||| ||| ||| || |||||||| ||||| |||||| Sbjct 805402 GATACTATTGAAAATGTCAAAGCAAAGATTCAAGATAAAGAAGGTATTCCCCCAGATCAA 805461 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 ||| | || || | ||| || ||||||||||| ||| | || || |||| || ||| Sbjct 805462 CAACGTCTGATCTTTGCTGGTAAACAATTGGAGGATGGTCGTACACTGTCCGACTACAAT 805521 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 || ||||| ||||| || || || || ||| | || || || ||||| Sbjct 805522 ATCCAAAAGGAATCAACCCTCCACTTGGTGCTTCGCCTCCGTGGTGG 805568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421735655591320