Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq10 123 2e-23 seq39 120 2e-22 seq44 109 4e-19 >seq10 Length=2329298 Score = 123 bits (136), Expect = 2e-23 Identities = 168/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 |||||| || | || | || || || ||||| || ||||||||||||||||||||| Sbjct 1253881 CATTCCACCACGTAGACGCAGAACTAGATGAAGTGTTGACTCCTTTTGGATGTTGTAATC 1253822 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || | ||| | || |||| |||||| |||||||||||||| || |||||||||| Sbjct 1253821 GGACAAAGTGCGACCATCTTCCAACTGCTTACCGGCAAAGATCAATCGTTGCTGATCTGG 1253762 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 || | |||||| || ||| || || || | || ||| | || || || | | || Sbjct 1253761 TGGAATACCTTCTTTGTCCTGGAT-TTTAGCCTTAACATTCTCGATCGTATCTGATGGTT 1253703 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | ||||||| ||||| ||||| || || | ||||| ||||| || ||||| Sbjct 1253702 CAACCTCCAATGTAATTGTCTTACCGGTCAAAGTCTTAACGAAAATCTGCAT 1253651 Score = 105 bits (116), Expect = 5e-18 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| || || ||| ||||| |||||||| || |||| | ||| |||| ||| Sbjct 1254999 ACCAAATGGAGAGTGGATTCCTTCTGGATGTTATAGTCGGACAAAGTGCGACCGTCTTCC 1254940 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 | ||||| || |||||||| | ||| || ||||||| ||| | ||||| || ||| Sbjct 1254939 AATTGCTTACCAGCAAAGATAAGACGTTGTTGATCTGGAGGAATCCCTTCTTTGTCCTGA 1254880 Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||| || |||| | || ||||| | | ||| ||||||| || || || || Sbjct 1254879 ATCTTGGCCTT-AACGTTCTCAATTGTGTCTGACGGTTCAACCTCCAAAGTGATAGTTTT 1254821 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || | |||||||||||||||||||| Sbjct 1254820 GCCGGTTAAAGTCTTCACGAAGATTTGCAT 1254791 Score = 102 bits (112), Expect = 6e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| ||| || || |||||||| || |||||||| | ||| ||| | || ||| Sbjct 1254315 ACCAAGTGGAGAGTAGATTCCTTTTGAATATTGTAATCAGAAAGTGTGCGTCCATCTTCC 1254256 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 | ||||| || |||||||| | ||| |||||||||| || | |||||||| ||| Sbjct 1254255 AATTGCTTTCCAGCAAAGATAAGACGTTGCTGATCTGGGGGAATTCCTTCCTTATCCTGA 1254196 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 || || ||| | || | ||||| |||| | ||| || |||| || ||||| || Sbjct 1254195 ATTTTAGCCTTAACATTTTCGATGGTATCGGATGGTTCGACTTCCAATGTTATCGTTTTA 1254136 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || | || ||||||||||| ||||| Sbjct 1254135 CCAGTCAAAGTTTTCACGAAGATCTGCAT 1254107 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 |||||| || | || | || ||||| || || || ||||||||||||||||||||| Sbjct 1254109 CATTCCACCACGTAGACGCAGAACCAGATGGAGAGTTGACTCCTTTTGGATGTTGTAATC 1254050 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || | ||| | || || | || || ||||||||||| | || |||||||| | Sbjct 1254049 GGACAAAGTGCGACCATCCTCTAATTGTTTACCGGCAAAGATGAGTCGTTGCTGATCCGG 1253990 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 || | ||| ||||| || ||||| |||| || ||| | ||||| |||| | | Sbjct 1253989 TGGGATACCCTCCTTATCTTGGATCTT-AGCTTTAACATTCTCAATGGTATCGGATGGCT 1253931 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || |||| || || || || || || | ||||| || ||||| ||||| Sbjct 1253930 CGACTTCCAGAGTGATAGTTTTGCCAGTCAATGTCTTTACAAAGATCTGCAT 1253879 Score = 87.8 bits (96), Expect = 1e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 ||||||||| ||||| ||||| | || ||| | || || ||||| || || ||||| Sbjct 1252930 CTCCTTTTGAATGTTATAATCAGACAGCGTGCGACCATCTTCTAGCTGTTTGCCAGCAAA 1252871 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 |||||| | ||||| |||| ||| | || || || ||| ||||| ||| | | Sbjct 1252870 GATCAATCTTTGCTGGTCTGGAGGAATTCCCTCTTTATCCTGAATCTTAGCCTTAACGTT 1252811 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | | ||||| || | | || || |||| || || || || || || || |||||||| Sbjct 1252810 TTCAATGGTATCAGAAGGCTCAACTTCCAAGGTGATAGTTTTGCCTGTTAGTGTCTTCAC 1252751 Query 44326 GAAGATTTGCATGATGTG 44343 ||||| ||||| |||| Sbjct 1252750 AAAGATCTGCATTTTGTG 1252733 >seq39 Length=1160777 Score = 120 bits (132), Expect = 2e-22 Identities = 153/211 (73%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||| ||| || || |||||| |||||||||||||||| ||| ||| | || || Sbjct 535132 CACCAAGTGCAGGGTAGACTCCTTCTGGATGTTGTAATCGGAAAGTGTGCGACCATCCTC 535073 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 ||||| || ||||| || |||| |||||| ||||||| || | || ||||| ||| Sbjct 535072 AAGCTGTTTACCGGCGAAAATCAGACGCTGTTGATCTGGGGGGATTCCCTCCTTGTCCTG 535013 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 |||||| || | || | || ||||| | || || ||||| | || || ||||| Sbjct 535012 GATCTTCGCTTTGACATTTTCAATAGTGTCTGAGGGCTCGACCTCAAGAGTGATGGTCTT 534953 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || || ||||| || |||||||| |||||| Sbjct 534952 ACCGGTTAGGGTTTTTACGAAGATCTGCATG 534922 >seq44 Length=1094211 Score = 109 bits (120), Expect = 4e-19 Identities = 153/212 (72%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||| ||| || || ||||||||||| ||||| |||| ||| || | || || Sbjct 805551 CACCAAGTGGAGGGTTGATTCCTTTTGGATATTGTAGTCGGACAGTGTACGACCATCCTC 805492 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 || || || || |||||||||| ||| || ||||||| || | |||||| || || Sbjct 805491 CAATTGTTTACCAGCAAAGATCAGACGTTGTTGATCTGGGGGAATACCTTCTTTATCTTG 805432 Query 44248 TATCTTCTGC-TTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||| || | || | || || || | || ||| ||||| | || || |||| Sbjct 805431 AATCTT-TGCTTTGACATTTTCAATAGTATCAGAGGGTTCGACCTCAAGAGTGATGGTCT 805373 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 | ||||| |||||||| ||||| ||||||||| Sbjct 805372 TGCCCGTTAGGGTCTTTACGAAAATTTGCATG 805341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359925927406815