Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proctacanthus_20coquilletti_20[genbank_20GCA_5F001932985.1_202017- 01-04] 14,695 sequences; 208,907,727 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq10 161 2e-34 seq44 132 1e-25 >seq10 Length=2329298 Score = 161 bits (178), Expect = 2e-34 Identities = 167/219 (76%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||||||||||||||| || || || ||||||||| | || || ||| ||| || Sbjct 1252970 CAAATTTTCGTGAAAACTCTTACTGGCAAGACGATCACCTTGGAAGTTGAACCCTCTGAT 1253029 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || ||||| || ||| || ||||| |||||||| || || || || || || || Sbjct 1253030 ACAATTGAGAATGTGAAAGCTAAAATTCAAGACAAAGAGGGCATTCCACCAGATCAACAG 1253089 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || |||||||| || ||||||||| | || ||||| | || || ||||||| || || Sbjct 1253090 CGTCTTATCTTTGCTGGAAAACAGTTGGAGGATGGTCGTACACTCTCCGATTACAATATC 1253149 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||||||| || || || |||||||| ||||| | ||| Sbjct 1253150 CAAAAAGAGTCTACCCTTCATCTTGTGCTGAGATTGAGA 1253188 Score = 147 bits (162), Expect = 5e-30 Identities = 153/201 (76%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| |||||||| ||| | || || ||||| ||||| | ||||| ||| |||||| Sbjct 1254794 CAAATCTTCGTGAAGACTTTAACCGGCAAAACTATCACTTTGGAGGTTGAACCGTCAGAC 1254853 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || |||||||| || |||||||||||||||||||| || ||||| || || ||| Sbjct 1254854 ACAATTGAGAACGTTAAGGCCAAGATTCAGGACAAAGAAGGGATTCCTCCAGATCAACAA 1254913 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || |||||||| || || || || | ||||| || | ||| | |||| |||||| || Sbjct 1254914 CGTCTTATCTTTGCTGGTAAGCAATTGGAAGACGGTCGCACTTTGTCCGACTATAACATC 1254973 Query 178104 CAAAAAGAATCAACACTGCAT 178124 || || ||||| || || ||| Sbjct 1254974 CAGAAGGAATCCACTCTCCAT 1254994 Score = 145 bits (160), Expect = 2e-29 Identities = 158/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || ||| | || || || || || || | ||||| ||| ||||| Sbjct 1253654 CAGATTTTCGTTAAGACTTTGACCGGTAAGACAATTACATTGGAGGTTGAACCATCAGAT 1253713 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || |||||||| || || || || |||||||||||||| || || || || |||||| Sbjct 1253714 ACGATCGAGAATGTTAAGGCTAAAATCCAGGACAAAGAAGGTATTCCACCAGATCAGCAA 1253773 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | ||||| ||||| || ||| | |||||||| | ||| | ||||||| ||| || Sbjct 1253774 CGATTGATCTTTGCCGGTAAGCAGTTGGAAGATGGTCGCACTTTGTCCGATTACAACATC 1253833 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133 ||||| || |||||||| ||||| ||| || Sbjct 1253834 CAAAAGGAGTCAACACTTCATCTAGTTCTG 1253863 Score = 145 bits (160), Expect = 2e-29 Identities = 161/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| ||||| || | || || ||||||||||| | || || ||| || || Sbjct 1255022 CAGATTTTTGTGAAGACCTTGACGGGTAAAACGATCACTTTGGAAGTTGAACCTTCTGAT 1255081 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || ||||| || || ||||| || |||||||| ||||| || |||||| Sbjct 1255082 ACCATTGAAAATGTCAAGGCTAAAATCCAGGATAAGGAAGGAATTCCTCCAGATCAGCAA 1255141 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | || || ||||| ||||| ||||| ||||| | ||||| ||||||||||| || Sbjct 1255142 CGTTTGATTTTTGCCGGTAAACAACTCGAGGATGGCCGCACTCTGTCCGATTATAACATC 1255201 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 || || || ||||| |||||||||| | ||||| Sbjct 1255202 CAGAAGGAGTCAACCTTGCATCTTGTCCTTAGACT 1255236 Score = 138 bits (152), Expect = 3e-27 Identities = 157/210 (75%), Gaps = 3/210 (1%) Strand=Plus/Plus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| | || || ||||| || || ||||| ||||| |||||| | || || || Sbjct 1252736 AAAATGC---AGATCTTTGTGAAGACACTAACAGGCAAAACTATCACCTTGGAAGTTGAG 1252792 Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034 || || ||||| || ||||| || ||||||||||| ||||| ||||| ||||| Sbjct 1252793 CCTTCTGATACCATTGAAAACGTTAAGGCTAAGATTCAGGATAAAGAGGGAATTCCTCCA 1252852 Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094 ||||||||| || | ||||| || || |||||||| |||||||| | || || | ||| Sbjct 1252853 GACCAGCAAAGATTGATCTTTGCTGGCAAACAGCTAGAAGATGGTCGCACGCTGTCTGAT 1252912 Query 178095 TATAACGTCCAAAAAGAATCAACACTGCAT 178124 |||||| | ||||| || || || || ||| Sbjct 1252913 TATAACATTCAAAAGGAGTCGACCCTACAT 1252942 Score = 132 bits (146), Expect = 1e-25 Identities = 153/205 (75%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || |||||||||||| | || || |||||||| || | || || ||| || || Sbjct 1254110 CAGATCTTCGTGAAAACTTTGACTGGTAAAACGATAACATTGGAAGTCGAACCATCCGAT 1254169 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || || || || |||||||| || |||||||| || || || |||||| Sbjct 1254170 ACCATCGAAAATGTTAAGGCTAAAATTCAGGATAAGGAAGGAATTCCCCCAGATCAGCAA 1254229 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || |||||||| || ||||| || | ||||||||| | || ||| | ||||| || | Sbjct 1254230 CGTCTTATCTTTGCTGGAAAGCAATTGGAAGATGGACGCACACTTTCTGATTACAATATT 1254289 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 ||||| ||||| || || || |||| Sbjct 1254290 CAAAAGGAATCTACTCTCCA-CTTG 1254313 Score = 127 bits (140), Expect = 5e-24 Identities = 152/205 (74%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||||||||||||||| || || ||||||||||| | || || ||| || ||| Sbjct 1253426 CAGATTTTCGTGAAAACTCTTACTGGCAAAACGATCACATTGGAAGTTGAACCTTCTGAC 1253485 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || || ||||||||| || || |||||||| ||||| || |||||| Sbjct 1253486 ACTATTGAAAATGTGAAGGCAAAGATTCAAGATAAGGAAGGAATTCCTCCAGATCAGCAA 1253545 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||||| ||||| || || ||||| | || ||||| | || | | |||||||| | Sbjct 1253546 CGACTCATCTTTGCTGGGAAACAATTGGAGGATGGCCGTACCTTATCTGATTATAATATT 1253605 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || || || || |||| Sbjct 1253606 CAGAAGGAGTCCACCCTCCA-CTTG 1253629 Score = 127 bits (140), Expect = 5e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || || | || || ||||| ||||| || || || || || || Sbjct 1253882 CAGATCTTTGTAAAGACATTGACTGGCAAAACTATCACTCTGGAAGTCGAGCCATCCGAT 1253941 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| ||||| || ||| ||||| || || || || || ||||| ||||| |||||| Sbjct 1253942 ACCATTGAGAATGTTAAAGCTAAGATCCAAGATAAGGAGGGTATCCCACCGGATCAGCAA 1254001 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||||| ||||| ||||| ||||| | || ||||| | ||| | ||||||| ||| || Sbjct 1254002 CGACTCATCTTTGCCGGTAAACAATTAGAGGATGGTCGCACTTTGTCCGATTACAACATC 1254061 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133 ||||| || ||||| || ||||| ||| || Sbjct 1254062 CAAAAGGAGTCAACTCTCCATCTGGTTCTG 1254091 Score = 100 bits (110), Expect = 7e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| || || || | || || |||||||| || | || || ||| || ||| Sbjct 1254566 CAGATTTTTGTTAAGACGTTGACTGGCAAAACGATTACTTTGGAAGTTGAACCTTCTGAC 1254625 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || || ||||||||||| || ||||| ||||| || |||||||| Sbjct 1254626 ACTATTGAAAATGTGAAGGCTAAGATTCAGGATAAGGAAGGCATCCCCCCAGACCAGCAG 1254685 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | || || || || || || | ||||| ||| | || ||| |||| |||||| | Sbjct 1254686 AGATTAATTTTTGCTGGCAAGCAATTGGAAGACGGACGCACACTTTCCGACTATAACATT 1254745 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 || || || || || || || | || ||||||| Sbjct 1254746 CAGAAGGAGTCCACTCTCCACTTGGTACTGAGACT 1254780 Score = 91.5 bits (100), Expect = 4e-13 Identities = 144/205 (70%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||| || || ||| | || || || || |||||| | || || || ||| ||| Sbjct 1254338 CAAATTTTTGTAAAGACTTTAACTGGGAAGACCATCACCTTGGAAGTCGAGCCCTCTGAC 1254397 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || || |||||||| ||||||||||| || || || || |||||| Sbjct 1254398 ACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAAGAAGGCATTCCACCAGATCAGCAA 1254457 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | || || || || ||||| | || ||||| | || | | || || || || Sbjct 1254458 CGTTTGATTTTTGCTGGTAAACAATTGGAGGATGGGCGCACATTATCTGACTACAATATC 1254517 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || ||||| || || || || |||| Sbjct 1254518 CAGAAAGAGTCGACCCTTCA-CTTG 1254541 >seq44 Length=1094211 Score = 132 bits (146), Expect = 1e-25 Identities = 153/205 (75%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || || || || || || || ||||| || ||||| ||| ||| || Sbjct 805345 CAAATTTTCGTAAAGACCCTAACGGGCAAGACCATCACTCTTGAGGTCGAACCCTCTGAT 805404 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || |||||| ||||||||| || |||||||| || || || || || ||| Sbjct 805405 ACTATTGAAAATGTCAAAGCAAAGATTCAAGATAAAGAAGGTATTCCCCCAGATCAACAA 805464 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || || ||||| | || ||||| | || || |||| || || || Sbjct 805465 CGTCTGATCTTTGCTGGTAAACAATTGGAGGATGGTCGTACACTGTCCGACTACAATATC 805524 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 ||||| |||||||| || || |||| Sbjct 805525 CAAAAGGAATCAACCCTCCA-CTTG 805548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203504561865830