Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudococcus_20longispinus_20[genbank_20GCA_5F900064475.1_202016-03- 27] 66,857 sequences; 284,990,201 total letters Query= NC_003038.1 Length=212482 Score E Sequences producing significant alignments: (Bits) Value seq27188 129 8e-25 >seq27188 Length=4830 Score = 129 bits (142), Expect = 8e-25 Identities = 155/210 (74%), Gaps = 3/210 (1%) Strand=Plus/Minus Query 13542 AAAGTAACATAATTTGAATCGGTATCCCCATACACTACCCTTCCACCTAATTC---TTTT 13598 || ||||| ||||| ||||| ||||| || || | || |||| | ||||| |||| Sbjct 434 AATGTAACGTAATTGGAATCTGTATCGCCGTAAATTATTTTTCCTTCCAATTCGGTTTTT 375 Query 13599 AAATATTGAGAAACTTCTACAATACTTTTTCTACCCATATAAGTGGTACACATTGCAATG 13658 ||| ||| | ||| | |||||| | || || |||| ||| ||||||||||| Sbjct 374 AAAATTTGCGCCGCTTTTTGAATACTCTCTCGTCCTTTATATGTGACACACATTGCAAGA 315 Query 13659 GGCATAAATGGTAAAGCTCCAACTCTAACTCCAGTTGCACCATACATAGAATTAGCACTA 13718 |||||||| ||||| || || | |||| || | ||||||||||| |||||||||| | Sbjct 314 GGCATAAAAGGTAACGCACCGGATTTAACACCCATGGCACCATACATTGAATTAGCACAA 255 Query 13719 ATTTTATAAGAATTTTGACGTTTATCTAAA 13748 ||||||||||| ||| ||||| |||||| Sbjct 254 ATTTTATAAGATAATTGCCGTTTTTCTAAA 225 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 679246270608240