Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudococcus_20longispinus_20[genbank_20GCA_5F900064475.1_202016-03- 27] 66,857 sequences; 284,990,201 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq7785 197 1e-45 seq47140 140 3e-28 seq2470 140 3e-28 seq39894 138 1e-27 seq24804 132 4e-26 seq18352 129 5e-25 seq38187 120 3e-22 seq28943 82.4 7e-11 >seq7785 Length=64017 Score = 197 bits (218), Expect = 1e-45 Identities = 317/455 (70%), Gaps = 8/455 (2%) Strand=Plus/Plus Query 23249 TACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGC 23308 |||||| |||||| | ||||| || |||| |||| ||| || ||||| ||| Sbjct 8811 TACTTTCGGTACAGTTCATCAAACTCTTCACCCCAACAATCGAACAACCCGGGACATTCA 8870 Query 23309 ATCGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGT 23368 | || ||||| |||||||| || ||||||||||| | ||||||||| ||| || Sbjct 8871 CTGGGGCACATCAGACTCCATTTTACATCATTTTCAACCCTTCTCATAAACTCATCGGGA 8930 Query 23369 ATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTC 23428 ||||||| ||||||||| | || | || || ||| ||||| |||| |||||| || Sbjct 8931 ATCCATAAAGCGTAGAATAAATCTCTTGCACGAGACTCTTCTTTACCGGAATTCTTTCTC 8990 Query 23429 AAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCC 23488 | ||||| || || || | ||| |||||| || || | ||||| |||||| || ||| Sbjct 8991 AGTTCCAAGAAATCGAAAATAACCGAATGCCAAGGTTCTAAGTAAATGGCAAAAGCACCC 9050 Query 23489 GGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATC 23548 ||||| || ||||| || |||||||| || | ||| ||||| ||||| || | ||||| Sbjct 9051 GGTCTTTTGTTGCCTCCTTGATCGACATATCTGGCTGTGTTATTGTAAACGCGGAGCATA 9110 Query 23549 GGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTT----GCTCG 23604 || ||||||||||| || | ||| | || || | | | || || |||| Sbjct 9111 GGAACGAGACCGTTAGATACACCGTTTGTTCCAGCGATA----TAGCTATTGGTAGCTCT 9166 Query 23605 AACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTT 23664 | | ||| | || | ||| || || ||| | ||||||||||||| || || | | Sbjct 9167 GATGCAGTGTATATGCACACCAATTCCACCGGCTGATTTCGATATCAGAGCACAATTCGT 9226 Query 23665 CAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTT 23699 || |||| | | || || ||||| || || |||| Sbjct 9227 CAAGGTGTGGAATATACCTTCGATACTATCATCTT 9261 >seq47140 Length=38879 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 57634 AGGATCTGAGCGATTGGGATTCCCTCAAAGAATCTGAGAGAAATTTTATTAAACACGTGT 57693 ||||| | || |||||||| || ||| | || | || || ||| ||||| | Sbjct 14193 AGGATTTCAGAGATTGGGAGAAACTGAAACCAGAAGAAAAGAAGTTCATTTCGCACGTAT 14252 Query 57694 TGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCAC 57753 ||||||||||||| || ||||||||||| ||||| |||||||| |||||| | || | | Sbjct 14253 TGGCGTTTTTCGCAGCGTCCGATGGTATCGTTAATGAGAATTTAGTCGAACGTTTCTTTC 14312 Query 57754 AAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACG 57813 |||| || ||| | | || || ||| ||| |||||||||||| | | |||||||| | Sbjct 14313 AAGAGGTACAAATTCCTGAAGCCCGATTCTTCTACGGATTTCAAATCACTATTGAAAATG 14372 Query 57814 TGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGAC 57860 | ||||| |||||||| || | |||||||| ||||| || ||| Sbjct 14373 TACATTCGGAAATGTACAGCTTATTGATCGATACTTACGTAAAAGAC 14419 Score = 118 bits (130), Expect = 9e-22 Identities = 161/222 (73%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 57879 CTGTTCAACGCGATCGAAACAATGCCC-GCGATCGCCAAGAAGGCAGAGTGGTCAATCAA 57937 || |||||||| |||||||||||||| ||| | | || ||||| ||| || | | Sbjct 14509 CTATTCAACGCTATCGAAACAATGCCTTGCG-TGAAGAGAAAAGCAGATTGGGCATTGAG 14567 Query 57938 ATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGA 57997 ||||||| | | || || || | || ||| |||| ||||| || || ||||| Sbjct 14568 ATGGATAGCTGACCAAAACGCTACTTTTGGAGAAAGGATAATAGCGTTTGCAGCTGTCGA 14627 Query 57998 AGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGAT 58057 ||| || ||||||||||| || |||||||| ||||||||| | ||||| | || || || Sbjct 14628 AGGAATCTTCTTTTCGGGAAGTTTTGCGGCGATATTTTGGCTCAAGAAGAGAGGTCTTAT 14687 Query 58058 GCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGA 58099 ||| || |||| || || || || || |||||| | ||||| Sbjct 14688 GCCTGGATTGACTTTCAGTAATGAATTAATATCGAGAGACGA 14729 Score = 82.4 bits (90), Expect = 7e-11 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 57528 AATCCCCGTAGATTTGTCATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAA 57587 ||||| ||||||||||| || | ||||| ||||| ||||||||| ||||| ||| Sbjct 14006 AATCCTCGTAGATTTGTAATCATGCCGATCAAATATGATGACATTTGGGCCATGTTTAAA 14065 Query 57588 AAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGT 57622 || |||||||| ||||| ||||| | |||||||| Sbjct 14066 AAAGCAGAAGCTTCGTTCTGGACAGCTGAAGAAGT 14100 >seq2470 Length=523 Score = 140 bits (154), Expect = 3e-28 Identities = 160/214 (75%), Gaps = 1/214 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| || ||||| || ||||| || ||||| | || || || |||||| Sbjct 461 ATGCAAATCTTCGTTAAAACTCTCACCGGCAAGACCATCACTTTGGAAGTCGAGCCGTCC 402 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | |||||| || ||| | ||| |||||| |||||| | || || || ||| Sbjct 401 GATACGATCGAAAACGTTAAAGCAAAAATTCAGGACAAAGAAGGCATTCCACCTGATCAG 342 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || | | || ||||| || |||||||| ||||| ||| | ||||||||||| Sbjct 341 CAAAGATTGATCTTCGCCGGAAAACAGTTAGAAGATGGCCGTACTCTCAGCGATTATAAT 282 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTA 31406 |||||||||||||||||||||||| |||| |||| Sbjct 281 ATTCAAAAAGAATCGACTCTTCATTTGGT-CTTA 249 Score = 118 bits (130), Expect = 9e-22 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||||||||||||||| || || || || ||||| || || | || || ||||| ||| Sbjct 233 ATGCAAATTTTCGTAAAAACGCTCACCGGAAAAACTATTACATTGGAAGTGGAACCATCC 174 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | |||| || ||| | ||| || |||||||| | || || ||||| Sbjct 173 GACACGATTGAAAATGTGAAAGCCAAAATTCAAGATAAGGAAGGTATCCCACCGGACCAA 114 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || | |||| ||||| |||||||| |||||||| || ||||||| ||||| Sbjct 113 CAAAGATTAATTTTCGCCGGCAAACAATTGGAAGATGGCCGTACATTGAGCGACTATAAT 54 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 || ||||| ||||| || || |||||||| ||| Sbjct 53 ATCCAAAAGGAATCAACCCTCCATCTGGTCCTT 21 >seq39894 Length=23042 Score = 138 bits (152), Expect = 1e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| ||||||||||| ||||| || || ||||| ||||| | || || |||||||| Sbjct 11786 ATGCAGATTTTCGTAAAAACTCTCACCGGAAAAACCATCACTTTGGAAGTCGAACCGTCG 11727 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | |||||| || ||| || |||| || || |||||| | || ||||||||| Sbjct 11726 GATACGATCGAAAACGTAAAAGCGAAAATACAAGATAAAGAAGGCATCCCACCCGACCAG 11667 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || || |||| ||||| || ||||| ||||||||| || |||| |||||||| Sbjct 11666 CAACGATTAATCTTCGCCGGTAAACAATTGGAAGACGGCCGTACCTTGAGTGATTATAAT 11607 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGT 31401 ||||| ||||| || || ||||| |||| Sbjct 11606 ATTCAGAAAGAGTCCACACTTCACTTGGT 11578 Score = 134 bits (148), Expect = 1e-26 Identities = 159/214 (74%), Gaps = 1/214 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| ||||| ||||| || || || || ||||| ||||| | || || ||||||||| Sbjct 12698 ATGCAGATTTTTGTAAAAACGCTCACTGGAAAAACCATCACTTTGGAAGTCGAACCGTCC 12639 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | |||||| || ||| | ||| |||||| |||||| | || || || || Sbjct 12638 GATACGATCGAAAACGTAAAAGCAAAAATTCAGGACAAAGAAGGCATTCCACCTGATCAA 12579 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || || | || || || || ||||| ||||||||| | ||| | ||||||||||| Sbjct 12578 CAACGATTGATCTTTGCCGGAAAACAATTGGAAGACGGTCGAACTCTCAGCGATTATAAT 12519 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTA 31406 |||||||| ||||| ||||||||| |||| |||| Sbjct 12518 ATTCAAAAGGAATCTACTCTTCATTTGGT-CTTA 12486 Score = 131 bits (144), Expect = 1e-25 Identities = 158/214 (74%), Gaps = 1/214 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| || ||||| || ||||| || ||||| | || || || |||||| Sbjct 12242 ATGCAAATCTTCGTTAAAACTCTCACCGGCAAGACCATCACTTTGGAAGTCGAGCCGTCC 12183 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | |||||| || ||| | ||| |||||| |||||| | || || || ||| Sbjct 12182 GATACGATCGAAAACGTTAAAGCAAAAATTCAGGACAAAGAAGGCATTCCACCTGATCAG 12123 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || | | || ||||| || |||||||| ||||| ||| | ||||||||||| Sbjct 12122 CAAAGATTGATCTTCGCCGGAAAACAGTTAGAAGATGGCCGTACTCTCAGCGATTATAAT 12063 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTA 31406 |||||||| ||||| ||||||||| |||| |||| Sbjct 12062 ATTCAAAAGGAATCTACTCTTCATTTGGT-CTTA 12030 Score = 123 bits (136), Expect = 2e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||||||||||||||| || || ||||| ||||| || || | || || ||||| ||| Sbjct 12014 ATGCAAATTTTCGTAAAAACGCTCACAGGAAAAACTATTACGTTGGAAGTAGAACCATCC 11955 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | |||| || ||| | ||| || |||||||| | || || ||||| Sbjct 11954 GACACGATTGAAAATGTGAAAGCCAAAATTCAAGATAAGGAAGGTATCCCACCGGACCAA 11895 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || | |||| ||||| |||||||| |||||||| || ||||||| ||||| Sbjct 11894 CAAAGATTAATTTTCGCCGGCAAACAATTGGAAGATGGCCGTACATTGAGCGACTATAAT 11835 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 || ||||| ||||| || || |||||||| ||| Sbjct 11834 ATCCAAAAGGAATCAACCCTCCATCTGGTCCTT 11802 Score = 114 bits (126), Expect = 1e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||||||||||||||| || ||||||| |||||||| || | || || ||||| ||| Sbjct 12470 ATGCAAATTTTCGTAAAAACATTGACAGGAAAAACGATTACGTTAGAAGTCGAACCATCC 12411 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || ||| | ||| || |||||||| | || |||||||| Sbjct 12410 GACACGATTGAGAACGTGAAAGCCAAAATTCAAGATAAGGAAGGTATCCCACCCGACCAA 12351 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || || | || ||||| || |||||| | || || | || | ||||| ||||| Sbjct 12350 CAACGATTGATTTTCGCCGGTAAACAGCTTGAGGATGGTCGTACACTCAGCGACTATAAT 12291 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 || ||||| ||||| || || |||||||| ||| Sbjct 12290 ATCCAAAAGGAATCAACCCTCCATCTGGTCCTT 12258 >seq24804 Length=9356 Score = 132 bits (146), Expect = 4e-26 Identities = 143/188 (76%), Gaps = 1/188 (1%) Strand=Plus/Plus Query 57672 AGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAG 57731 |||||||| ||| |||||| || || |||||||| || || |||||||| ||||| || Sbjct 6506 AGAAATTT-ATTTCACACGTTTTAGCATTTTTCGCTGCCTCTGATGGTATCGTTAATGAA 6564 Query 57732 AATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGA 57791 ||| | |||||| | || | |||||||| ||| | | || || |||| || |||||| Sbjct 6565 AATCTAGTCGAACGTTTCTTTCAAGAAGTTCAAATTCCTGAAGCCAGATTTTTCTACGGA 6624 Query 57792 TTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTAC 57851 |||||| | | ||||| || || ||||||||||||||| || | ||||| || ||| Sbjct 6625 TTTCAAATCACTATTGAGAATGTACATTCAGAAATGTATAGTTTATTGATCGACACTTAC 6684 Query 57852 GTGAAGGA 57859 || ||||| Sbjct 6685 GTTAAGGA 6692 Score = 104 bits (114), Expect = 2e-17 Identities = 156/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 57882 TTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGG 57941 |||||||| || ||||| ||||| || | ||| ||||| ||| | | |||||| Sbjct 6782 TTCAACGCTATTGAAACCATGCCTTGTGTCAAGAGGAAAGCAGATTGGGCTCTGAAATGG 6841 Query 57942 ATAAAA-AGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGG 58000 || | | ||| |||| || | || || | || ||||| || || |||||||| Sbjct 6842 ATTGCTGATCAAAACG-CCACTTTTGGAGAAAGAATCATAGCGTTTGCAGCTGTCGAAGG 6900 Query 58001 TATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCC 58060 ||| |||||||| || || ||||| |||||||||||| | || || || ||||| ||||| Sbjct 6901 TATCTTCTTTTCTGGAAGTTTTGCCGCAATATTTTGGCTCAAAAAGCGAGGCCTAATGCC 6960 Query 58061 CGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGA 58099 || |||| || || || || ||||||| | ||||| Sbjct 6961 TGGATTGACTTTCAGTAATGAACTGATATCAAGAGACGA 6999 >seq18352 Length=35742 Score = 129 bits (142), Expect = 5e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| ||||| |||| |||||||||||||| |||| || ||||| | Sbjct 19307 ATGCAAATTTTCGTGAAGACCTTGACTGGCAAAACGATCACGCTCGAAGTCGAACCCAGC 19366 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | | |||| ||||| | ||| ||||| || || | || ||||||||| Sbjct 19367 GACACTATAGAAAATGTCAAGGCAAAAATTCAAGACAAAGAGGGAATTCCCCCCGACCAG 19426 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || ||||| || ||||| |||||||| | ||||| || | || |||||| Sbjct 19427 CAACGTCTCATTTTCGCCGGCAAACAACTCGAAGATGGCCGCACACTTTCGGACTATAAC 19486 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||||||||||||| ||||| || |||| || | || || || |||| Sbjct 19487 ATTCAAAAAGAATCCACTCTCCACTTGGTCCTCCGTCTCAGAGGAGGTA 19535 Score = 120 bits (132), Expect = 3e-22 Identities = 164/226 (73%), Gaps = 5/226 (2%) Strand=Plus/Plus Query 31181 ATTGAATCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGAC 31240 |||| | |||| ||||| || |||||||| || |||| || |||||||||||| |||| Sbjct 19068 ATTGCAGCAAA-ATGCAGATCTTCGTAAAAACGTTGACTGGGAAAACGATCACCCTCGAG 19126 Query 31241 GTTGAACCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTG 31300 |||||||| ||||| | |||| || ||| || ||| ||| || ||||| | Sbjct 19127 GTTGAACCAAGCGACACCATTGAAAACGTTAAAGCGAAAATTCAGGATAAAGAAGGTATA 19186 Query 31301 CCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGA--CTA 31358 ||||| || ||||| ||| | || ||||| || || || | |||||| || | ||| Sbjct 19187 CCGCCAGATCAGCAACGTTTGATTTTCGCCGGAAAGCAACTCGAAGACGGTAGAACCCTA 19246 Query 31359 TGAGCGATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 | | || || |||||||||||||| ||||| | ||| |||| || Sbjct 19247 TCA--GACTACAACATTCAAAAAGAGTCGACCTTACATTTGGTTCT 19290 Score = 118 bits (130), Expect = 9e-22 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| || ||| | || |||||||| |||||| |||| ||||| || Sbjct 19763 ATGCAAATTTTCGTTAAAACTTTAACCGGCAAAACCATCACCCTCGAAGTTGAGCCCAGT 19822 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||||| ||||| | ||| || || || || | || || |||||| Sbjct 19823 GACACCATCGAAAACGTCAAGGCCAAAATCCAAGATAAAGAGGGTATCCCTCCGGACCAG 19882 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || ||||| || ||||| || ||||| | |||||| || || ||||| ||| Sbjct 19883 CAACGTCTCATTTTCGCCGGTAAACAACTCGAAGACGGCCGAACATTGTCGGATTACAAC 19942 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 |||||||||||||| || || ||| |||||||| Sbjct 19943 ATTCAAAAAGAATCAACCCTACATTTGGTACTT 19975 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||||||||||||||| ||| | || ||||||||||| ||| | || || || || Sbjct 19991 ATGCAAATTTTCGTAAAAACTTTAACTGGCAAAACGATTACCCTGGAAGTAGAGCCCAGT 20050 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||||| ||||| | ||| || || |||||| | || || |||||| Sbjct 20051 GACACCATCGAAAATGTCAAGGCCAAAATCCAAGATAAAGAAGGCATACCTCCGGACCAG 20110 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || ||| |||| ||||| || |||||| | |||||| || || | || || ||| Sbjct 20111 CAACGTTTAATTTTCGCCGGAAAACAGCTCGAAGACGGTAGAACCCTTTCTGACTACAAC 20170 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 || ||||| ||||| || || ||| |||| ||| | |||| || || Sbjct 20171 ATCCAAAAGGAATCTACGCTCCATTTGGTTCTTCGTTTGAGAGGAGG 20217 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| || || | || || ||||| ||||| |||| || ||||| | Sbjct 19535 ATGCAAATTTTCGTGAAAACATTAACCGGTAAAACTATCACGCTCGAAGTCGAACCAAGC 19594 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | | || | ||||| | ||| |||||||||||| | || || ||||| Sbjct 19595 GACACTATTGAGAACGTCAAGGCCAAAATTCAGGACAAGGAAGGTATACCACCTGACCAA 19654 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || ||||| || ||||| || ||||| | |||||| | || | ||| || ||| Sbjct 19655 CAACGTCTTATCTTCGCCGGTAAACAACTCGAAGACGGAAGAACCCTTTCCGACTACAAC 19714 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || ||||||||||| ||||| || |||| || | || || || |||| Sbjct 19715 ATCCAAAAAGAATCCACTCTCCACTTGGTCCTCCGTCTCAGAGGAGGTA 19763 Score = 109 bits (120), Expect = 5e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| || || |||| || ||||| ||||| |||| || || || | Sbjct 20219 ATGCAGATTTTCGTGAAAACCTTGACCGGAAAAACAATCACTCTCGAGGTCGAGCCTAGC 20278 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | |||||| ||||| | ||| || || |||||| | || ||||| ||| Sbjct 20279 GATACCATCGAAAACGTCAAGGCTAAAATTCAAGATAAAGAAGGCATTCCTCCCGATCAG 20338 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || ||||| || ||||||||||||||| | ||||| | || | ||||||||| Sbjct 20339 CAACGTCTTATTTTCGCTGGCAAACAGCTCGAAGATGGCAGAACGCTTTCGGATTATAAC 20398 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410 || ||||||||||| || | ||| ||||| | |||| Sbjct 20399 ATCCAAAAAGAATCTACGTTACATTTGGTATTGCGACT 20436 >seq38187 Length=9425 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| || || || || || ||||| ||||| | | || || || | | Sbjct 2986 ATGCAAATTTTCGTTAAAACGCTAACCGGTAAAACAATCACATTGAAAGTCGAGCCATGC 3045 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | | |||| ||||| | |||| ||| || ||||| | || || || || Sbjct 3046 GATACTATTGAAAACGTCAAGGCTAAAATACAGGATAAAGAAGGTATCCCACCGGATCAA 3105 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || || |||| ||||| || ||||| ||| ||||| || |||||||||||||| Sbjct 3106 CAACGATTAATCTTCGCCGGTAAACAATTGAAAGACGGCCGTACCTTGAGCGATTATAAC 3165 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGT 31401 |||||||||||||| || |||||| |||| Sbjct 3166 ATTCAAAAAGAATCCACACTTCATTTGGT 3194 >seq28943 Length=35018 Score = 82.4 bits (90), Expect = 7e-11 Identities = 165/245 (67%), Gaps = 0/245 (0%) Strand=Plus/Plus Query 23246 TCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGAT 23305 || ||||||| ||| || ||| ||||| | || |||| || || || || || Sbjct 14307 TCTTACTTTTTGTATAAACTGTCGAATTCTTCTCCCCAACAATCTTGAAGACCAGGACAT 14366 Query 23306 TGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCC 23365 || | || ||||| |||||||| || || ||||| || || | |||||| |||| Sbjct 14367 TGACTAGGGCACATAAGACTCCATTTTTCTTCTTTTTCTACACGCCGCATAAACTCATCC 14426 Query 23366 GGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTT 23425 |||||||||| || || || | || | || | | || || | |||||| || || Sbjct 14427 GGTATCCATAACGCATAAAATAAATCCCTAGCTCTAATTTCTTCGTGGCCGGTATTTTTA 14486 Query 23426 TTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCG 23485 ||||| || ||||| || | || || ||||| || || || ||||| || || || Sbjct 14487 CGTAAATCTAAGAAGTCAAAGATATCGGCGTGCCAAGGTTCAAGATAAACAGCGAAAGCT 14546 Query 23486 CCCGG 23490 || || Sbjct 14547 CCTGG 14551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445393867447440