Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudococcus_20longispinus_20[genbank_20GCA_5F900064475.1_202016-03- 27] 66,857 sequences; 284,990,201 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq50643 118 6e-22 >seq50643 Length=8654 Score = 118 bits (130), Expect = 6e-22 Identities = 184/263 (70%), Gaps = 0/263 (0%) Strand=Plus/Plus Query 3873 AAGGTGTACATTTTATGATGGCTGACGGTGGGTTCTCGGTTGAGGGTCAAGAAAATATGC 3932 ||||||| ||||| |||||||| ||||| || ||||| || || || | ||||| || | Sbjct 3310 AAGGTGTGCATTTCATGATGGCCGACGGCGGATTCTCAGTCGAAGGAAACGAAAACATAC 3369 Query 3933 AAGAAATGTTATCGAAAAAGATGTATTTGTGTCAATGTTTAATTGCATTGATGATCATAC 3992 ||||||| | || ||| || || | || || || | |||||||| ||| | | Sbjct 3370 AAGAAATACTTTCAAAACGAATTTACCTTTGCCAGTGCCTGGTTGCATTGTCGATAGTTC 3429 Query 3993 GAATTGGTGGTCATTGTGTTATCAAATTTTTCGATATATTTACACCTTTTAGTGCTGGTT 4052 ||| || |||| ||| |||||| ||||| || |||||||| || |||| ||| Sbjct 3430 GAAAAAACGGCCATTTCGTTTGCAAATTATTCGACATCTTTACACCGTTCAGTGTTGGCA 3489 Query 4053 TAGTGTATTTGATGTATAGATCTTTTAATCGTATTTGTATTTTCAAACCACATTCATCGC 4112 | | ||||||||||||| | |||||| || | ||| ||||| || | | Sbjct 3490 TCATATATTTGATGTATAATTGTTTTAAGAAGATCTCCATTCATAAACCGAATACCAGTC 3549 Query 4113 GACCGGCCAATTCTGAAAGATAT 4135 | ||||| ||||| ||||||||| Sbjct 3550 GTCCGGCTAATTCGGAAAGATAT 3572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 276328258682071