Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudococcus_20longispinus_20[genbank_20GCA_5F900064475.1_202016-03- 27] 66,857 sequences; 284,990,201 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq17302 78.8 2e-11 >seq17302 Length=8610 Score = 78.8 bits (86), Expect = 2e-11 Identities = 105/146 (72%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 3343 CGAGTCTTTCCAACAATCACTCGATGTACTTTTCACAAATACGGTCCTTCGGGCTCCCTG 3402 || || ||||||| | | || ||| || || ||||||||||||||||| || | || Sbjct 4212 CGTGTGTTTCCAAAAGTGACCAAATGAACCTTCCACAAATACGGTCCTTCCGGTACGGTG 4153 Query 3403 GAAAACTACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAGAAGATCTACATT 3462 | || | ||| || || ||| | || ||| ||| | ||||||||||| || ||| | Sbjct 4152 CAGAAATTCGACGGTCTGTGCGTACTGCCGCTGAATATCGTCAACGAGAAAATTTACGTA 4093 Query 3463 TTCCTCTGGTTCTGGTTCTACGTGCT 3488 ||| | ||||| |||||| | |||| Sbjct 4092 TTCTTATGGTTTTGGTTCATCTTGCT 4067 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12470874019500