Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudococcus_20longispinus_20[genbank_20GCA_5F900064475.1_202016-03- 27] 66,857 sequences; 284,990,201 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq22961 84.2 3e-11 >seq22961 Length=8319 Score = 84.2 bits (92), Expect = 3e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 153288 TACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTGGAAGCTTTATTCAATTACCAA 153347 ||||| || |||||| ||| || |||| || | |||||| ||||||||||| |||| Sbjct 7070 TACACGCCTTATCAATGTGAAATTTCTCTAGGTCGCTTGGAAAATTTATTCAATTTCCAA 7011 Query 153348 ACGCTCATCACAGAACTTACAGGATTACCAATAGCAAACGCATCTCTATTAGATGAAGCA 153407 || | ||||| || || | |||||| | | || || |||||| | | || |||| Sbjct 7010 ACCATGATCACCGAGCTGAGTGGATTAGAAGTTGCGAATGCATCTTTGCTTGACGAAGGC 6951 Query 153408 ACTGCAGCAGCAGAAGCAATG 153428 || |||||||| ||||| ||| Sbjct 6950 ACCGCAGCAGCCGAAGCGATG 6930 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578728744622880