Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudococcus_20longispinus_20[genbank_20GCA_5F900064475.1_202016-03- 27] 66,857 sequences; 284,990,201 total letters Query= NC_015780.1 Length=205791 Score E Sequences producing significant alignments: (Bits) Value seq27188 84.2 3e-11 seq7785 84.2 3e-11 >seq27188 Length=4830 Score = 84.2 bits (92), Expect = 3e-11 Identities = 99/133 (74%), Gaps = 1/133 (1%) Strand=Plus/Plus Query 131790 TACAAAATATCTGCAAATTCAATGTATGGTATTACAGGTGTTAAAGCTGGAATGTTACCT 131849 || ||||| | ||| ||||||||||||||| | ||||||||| | || ||||||| Sbjct 247 TATAAAATTTGTGCTAATTCAATGTATGGTGCCATGGGTGTTAAATCCGGTGCGTTACCT 306 Query 131850 TTTATGCCTGTTGCAATGACTATTACTTATATGGGTAGAAAAAGTGTTTTAAAAGCTGC- 131908 ||||||||| |||||||| | | || |||| || || | ||| || |||||| || Sbjct 307 TTTATGCCTCTTGCAATGTGTGTCACATATAAAGGACGAGAGAGTATTCAAAAAGCGGCG 366 Query 131909 CAAATATGGAAAA 131921 ||||| | |||| Sbjct 367 CAAATTTTAAAAA 379 >seq7785 Length=64017 Score = 84.2 bits (92), Expect = 3e-11 Identities = 200/301 (66%), Gaps = 5/301 (2%) Strand=Plus/Plus Query 104992 AGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCTGGAGCTCAATATATCGA 105051 ||||||| | || || |||| ||||| |||||||||||| |||||| | || | || Sbjct 36924 AGGTGATCTCGGTCCTGTTTACGGATTCCAATGGAGACATTTCGGAGCTGAGTACAAAGA 36983 Query 105052 CTGTGATACCGACTATACCGGCCAAGGTATAGACCAATTAAGTCAAGTTATAGAAACTAT 105111 | | ||||| || || | |||| | || ||| || | || ||||| || || Sbjct 36984 CATGCACACCGATTACACGAACAAAGGAGTGGATCAACTACAAAACGTCATAGATACCAT 37043 Query 105112 AAAAAATAACCCCGGGTGTCGAAGAATAATTATAGATAGTTGGAATGTGTCACAATTATC 105171 | |||||||| | ||| || ||||||| || | ||||| | | ||| | Sbjct 37044 TAGGAATAACCCAGACTGTAGACGAATAATCTTATGTGCGTGGAACCCTCTAGATTTACC 37103 Query 105172 AGATATGGCTCTTCCACCGTGTCATTGTTTGGTACAATTTTACATTAGAAATAAA-ATTT 105230 | ||||| | || || |||||||| || ||||| |||||| | | |||| | Sbjct 37104 TAAAATGGCCTTACCTCCTTGTCATTGCTTAGTACAGTTTTAC----GCAGTAAACGGTG 37159 Query 105231 ATTTAGATTGTCAATTGTATCAAAGATCTGCAGATTTAGGATTAGGTGTACCATATAATA 105290 | || || ||| ||||||| | ||||| ||| | || ||||| ||||||| |||| Sbjct 37160 AATTGTCATGCCAAATGTATCAGCGTTCTGCTGATATGGGTTTAGGCGTACCATTCAATA 37219 Query 105291 T 105291 | Sbjct 37220 T 37220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657852964215720