Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudococcus_20longispinus_20[genbank_20GCA_5F900064475.1_202016-03- 27] 66,857 sequences; 284,990,201 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq64011 122 1e-22 >seq64011 Length=11036 Score = 122 bits (134), Expect = 1e-22 Identities = 147/200 (74%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 197085 ATTGTAACAGGCGAGTAAGAAAGCGCCGTAGGTTCCCGTTCTCTTTCCCACCCCGTTGAA 197144 || |||| ||||||| |||||| |||| || | || ||||| ||||| ||| | | Sbjct 10070 ATCGTAAGAGGCGAGCAAGAAACCGCCATAATTACCAGTTCTTTTTCCTTTACCGGTATA 10011 Query 197145 GCCTCCGATAACCACCAGATCCAGAGTGTCGCACACCCCTTCCATGTAATCTTTCTTCAG 197204 ||| ||||| ||||||||||| | ||| |||| || ||||| | ||||||||||| | Sbjct 10010 GCCACCGATGACCACCAGATCTAAAGTATCGCCAACACCTTCTAGATAATCTTTCTTTAA 9951 Query 197205 TTTGAGCCAGCTTCTAGATCTCTTGGCAATCTCGTAGGTTGCGTTTACGTCCAGGGTCTT 197264 ||| | |||| ||| |||| ||||| || |||||||| || | || | || || Sbjct 9950 TTTTAACCAGTTTCGTGATCGTTTGGCGATTTCGTAGGTGGCTTCGGTATCTAATGTTTT 9891 Query 197265 GATCATCAATCCCTCGCAAT 197284 | ||||||||| ||||||| Sbjct 9890 TACCATCAATCCTTCGCAAT 9871 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676164048614160