Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudococcus_20longispinus_20[genbank_20GCA_5F900064475.1_202016-03- 27] 66,857 sequences; 284,990,201 total letters Query= NC_024451.1 Length=220222 Score E Sequences producing significant alignments: (Bits) Value seq53020 96.9 5e-15 >seq53020 Length=26954 Score = 96.9 bits (106), Expect = 5e-15 Identities = 92/118 (78%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 127473 AATATTTAGCAAAACCGTCAGATGTTTGGGCTATAGGAGTTATTTTTTATACAATGCTTT 127532 ||| ||||| |||||| || ||| | ||||| | || ||| |||| ||||||||||| | Sbjct 5280 AATTTTTAGGAAAACCTTCGGATATGTGGGCATTGGGTGTTGTTTTCTATACAATGCTCT 5221 Query 127533 ACGGACAATTTCCATTTTATGACTCTAAACCAAAAGAATTGTTTAGAAAAATTAAAGC 127590 |||| || || ||||||||||| |||| || | |||| |||| ||||||||||| Sbjct 5220 ACGGGCAGTTCCCATTTTATGATTCTAGTCCTACGCAATTATTTAATAAAATTAAAGC 5163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 703993571681040