Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudococcus_20longispinus_20[genbank_20GCA_5F900064475.1_202016-03- 27] 66,857 sequences; 284,990,201 total letters Query= NC_027916.2 Length=160358 Score E Sequences producing significant alignments: (Bits) Value seq7785 82.4 8e-11 >seq7785 Length=64017 Score = 82.4 bits (90), Expect = 8e-11 Identities = 207/309 (67%), Gaps = 12/309 (4%) Strand=Plus/Minus Query 31255 TAACTCGCTATGTTGAATGGTACACCCAATCCCAAATCGGCAGATCGTTGATATAACAAA 31314 ||||| || || ||||||||||| || || |||| ||| ||||| || ||||| | Sbjct 37229 TAACTAGCGATATTGAATGGTACGCCTAAACCCATATCAGCAGAACGCTGATACATTTGG 37170 Query 31315 CAGGAAAGTTCATCTCCGGTCA---CGTAAAATTGAAATAACACATGACAAGGCGGCAAA 31371 || || | |||| ||| | | ||||||| || | ||| ||||||||| || || Sbjct 37169 CATGACAATTCA---CCGTTTACTGCGTAAAACTGTACTAAGCAATGACAAGGAGGTAAG 37113 Query 31372 GCCATTTCACAGGT--ATCGACGGGATTCCAAGCGCTTACTAACAAACGCCGACTGGTTG 31429 ||||||| |||| ||| | || ||||| || | || | | || | || | || Sbjct 37112 GCCATTT--TAGGTAAATCTAGAGGGTTCCACGCACATAAGATTATTCGTCTACAGTCTG 37055 Query 31430 GATCACGCTTAATCTCTTCTATCACGGCTGTTATTTGATCGATTCCTTCACCCGTATAAT 31489 | | | | |||| ||||| ||| | || |||||| | ||||| ||| |||| Sbjct 37054 GGTTATTCCTAATGGTATCTATGACGTTTTGTAGTTGATCCACTCCTTTGTTCGTGTAAT 36995 Query 31490 TACTATCACAT-CCCTTGTAGGCTGCACCGAAATGTCGCCATTGAAACCCATAAATAGGT 31548 | | ||| | ||||| | || |||||||||| |||||| || || |||| ||| Sbjct 36994 CGGTGT-GCATGTCTTTGTACTCAGCTCCGAAATGTCTCCATTGGAATCCGTAAACAGGA 36936 Query 31549 CCCAGGTCA 31557 || || ||| Sbjct 36935 CCGAGATCA 36927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 512588864778960