Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudococcus_20longispinus_20[genbank_20GCA_5F900064475.1_202016-03- 27] 66,857 sequences; 284,990,201 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq7785 109 4e-19 >seq7785 Length=64017 Score = 109 bits (120), Expect = 4e-19 Identities = 177/255 (69%), Gaps = 0/255 (0%) Strand=Plus/Minus Query 29719 GGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCC 29778 |||||||||||| |||||||| ||||| | ||||| || ||||| || || || || || Sbjct 37263 GGTGACGTGAGCGATCATGTAAGTGAGCAAGGAGTAACTAGCGATATTGAATGGTACGCC 37204 Query 29779 GAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTCACGTA 29838 | ||||| || | || | ||| || | ||||| || | || |||| |||| Sbjct 37203 TAAACCCATATCAGCAGAACGCTGATACATTTGGCATGACAATTCACCGTTTACTGCGTA 37144 Query 29839 AAACTGACACATGGCATGGCACGGAGGAAGGGCCATGAGACCCAAGTCTTTGGGGTTCCA 29898 |||||| | | ||| || ||||| | |||||| | || ||| |||||||| Sbjct 37143 AAACTGTACTAAGCAATGACAAGGAGGTAAGGCCATTTTAGGTAAATCTAGAGGGTTCCA 37084 Query 29899 GGCACACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTG 29958 ||||| | ||| || || || |||||||| ||||| ||| || | | ||||||| Sbjct 37083 CGCACATAAGATTATTCGTCTACAGTCTGGGTTATTCCTAATGGTATCTATGACGTTTTG 37024 Query 29959 CAGCTGATCCACCCC 29973 || |||||||| || Sbjct 37023 TAGTTGATCCACTCC 37009 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405832250228302