Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomyrmex_20gracilis_20[refseq_20GCF_5F002006095.1_202017-02-23] 6,556 sequences; 282,776,121 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq63 91.5 2e-13 >seq63 Length=804878 Score = 91.5 bits (100), Expect = 2e-13 Identities = 139/196 (71%), Gaps = 4/196 (2%) Strand=Plus/Minus Query 16031 AATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTATAAGT 16090 ||||| ||||| |||||||| || || ||||| | || |||| |||||||| || Sbjct 5239 AATCTGTCTGCGACAAATTCGATGTAAGTGCACATGAGTTCAGAATTCATTCCTATCAGG 5180 Query 16091 CGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGATA 16150 | ||||| | |||| ||| ||||||| | ||| ||||| || || || | || || Sbjct 5179 CTAACCGGTAACGCTTCTGTCAAAAATTCCTTTTCGATCACCACAGCATCCATTATAATC 5120 Query 16151 TCGGTGGCTCGTGTTTCA--GACGGTGTATGGTTTAGGTGTTTAAACATTAGACACGCGA 16208 | || | || ||| | ||||| | || || |||||| |||||||||||||||| Sbjct 5119 T--GTTTCACGCGTTCGAACGACGGCTTTTGAACTATGTGTTTGAACATTAGACACGCGA 5062 Query 16209 AGTCGCAATGTAGTCC 16224 | || ||||| | ||| Sbjct 5061 AATCACAATGCAATCC 5046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511372489589920