Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomyrmex_20gracilis_20[refseq_20GCF_5F002006095.1_202017-02-23] 6,556 sequences; 282,776,121 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq138 95.1 9e-15 >seq138 Length=435971 Score = 95.1 bits (104), Expect = 9e-15 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 102035 TTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCA 102094 || || || || || ||||| ||||||||||| ||||| | |||||| ||||| || || Sbjct 421284 TTGTACTCGGCACCAAAATGTCTCCACTGAAAACCATAAATAGGTCCGAGATCGCCCTCT 421225 Query 102095 TCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATG 102154 | || || ||| ||| ||| || || | || |||||| |||||||||| Sbjct 421224 TTCCTATCGGTAAAGCCATAAGAATCCAAGAAGTCCCGTGAACCATTCTCATCCCAAATA 421165 Query 102155 TGCACGCCAGCTGCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGT 102214 || || |||| || ||||| | || || ||| |||||||||| | | Sbjct 421164 TGAACATTTTTGGCTGCCAGTTCTTTAGAATTTGTTGAGCCTTTGATAAACCAAAGTAAC 421105 Query 102215 TCTTCAACAACACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGGAAA 102264 |||||||| || ||| |||||||| ||| ||||| || || | |||||| Sbjct 421104 TCTTCAACTACTGCTCGCCAAAATATTCTTTTAGTTGTCAATAATGGAAA 421055 Score = 82.4 bits (90), Expect = 6e-11 Identities = 119/168 (71%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 101753 GTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCT 101812 ||||||||||| |||||| || | | | ||||| || |||||||| || |||||| Sbjct 421656 GTGACATGAGCGATCATGTAAATCAGCAAGGAATATGACGCTATGTTAAACGGTACTCCT 421597 Query 101813 AACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAA 101872 | |||||||| || ||||||||| ||| ||| || | |||| | || ||| Sbjct 421596 AGACCCATATCGGCGCTTCTTTGATAAAGTAACGCGGACAGTTCCCCATTGCTCACGTAA 421537 Query 101873 AATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCT 101920 || ||| || |||||| || ||||| |||| || ||||||||| Sbjct 421536 AACTGAACGAAACAATGACAGGGTGGCAATGCCATCTTCGGAATGTCT 421489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361222335577556