Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudomyrmex_20gracilis_20[refseq_20GCF_5F002006095.1_202017-02-23] 6,556 sequences; 282,776,121 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq138 122 7e-23 >seq138 Length=435971 Score = 122 bits (134), Expect = 7e-23 Identities = 183/260 (70%), Gaps = 0/260 (0%) Strand=Plus/Plus Query 20044 TTTCCCTTATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAGAGTTATTATGG 20103 ||||| ||||| || || ||| | |||||||| || || |||||||||||| | ||| Sbjct 421055 TTTCCATTATTGACAACTAAAAGAATATTTTGGCGAGCAGTAGTTGAAGAGTTACTTTGG 421114 Query 20104 TTTATTAAAGGATCAACAAATTCTACCGAGCTTGTAGAAAAAGGAGTTAAGATTTGGAGC 20163 ||||| ||||| ||||||||||||| || || | || ||| ||| | |||||| Sbjct 421115 TTTATCAAAGGCTCAACAAATTCTAAAGAACTGGCAGCCAAAAATGTTCATATTTGGGAT 421174 Query 20164 GCACATGGATCTAAGCAATTTTTACACAGCAATGGATTTGACAACCGTCAAGAGGGGGAT 20223 | |||| || | | || || | |||| ||| | | | ||||||| ||| Sbjct 421175 GAGAATGGTTCACGGGACTTCTTGGATTCTTATGGCTTTACCGATAGGAAAGAGGGCGAT 421234 Query 20224 TTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGACATGAAC 20283 | || ||| | ||||| ||||| |||||||||||||| || || || |||||| || Sbjct 421235 CTCGGACCTATTTATGGTTTTCAGTGGAGACATTTTGGTGCCGAGTACAAGGACATGCAC 421294 Query 20284 ACAAATTATTTTGGACAAGG 20303 ||| |||| |||||||| Sbjct 421295 ACAGATTACACGGGACAAGG 421314 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399152104699420