Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudomyrmex_20gracilis_20[refseq_20GCF_5F002006095.1_202017-02-23]
6,556 sequences; 282,776,121 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq144 87.8 4e-12
seq60 87.8 4e-12
>seq144
Length=417326
Score = 87.8 bits (96), Expect = 4e-12
Identities = 117/163 (72%), Gaps = 0/163 (0%)
Strand=Plus/Minus
Query 248800 TACGGCAAAGATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTC 248859
|||| || ||| || ||| ||| | | | |||||||||||| |||| || |
Sbjct 7774 TACGACAGAGACTTCAGTTACAATTACATCGGTTTCAAAACGCTCGAGAGGAGTTACTTG 7715
Query 248860 CTCAAAATTGATGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTC 248919
|| || || |||||||||| ||||| || ||| |||||||||||| ||||||| ||
Sbjct 7714 CTGAAGATCAATGGCAAGATAGTGGAGAGACCTCAACACATGTTGATGAGAGTGGCCGTT 7655
Query 248920 GGGATTCACAAGGATGACATAGAGAGCGTGCTCGAGACGTACA 248962
| |||||| | || || || || || || | ||||||||||
Sbjct 7654 GCTATTCACGAAGACGATATCGATAGGGTTATAGAGACGTACA 7612
>seq60
Length=814933
Score = 87.8 bits (96), Expect = 4e-12
Identities = 117/163 (72%), Gaps = 0/163 (0%)
Strand=Plus/Minus
Query 248800 TACGGCAAAGATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTC 248859
|||| || ||| || ||| ||| | | | |||||||||||| |||| || |
Sbjct 813649 TACGACAGAGACTTCAGTTACAATTACATCGGTTTCAAAACGCTCGAGAGGAGTTACTTG 813590
Query 248860 CTCAAAATTGATGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTC 248919
|| || || |||||||||| ||||| || ||| |||||||||||| ||||||| ||
Sbjct 813589 CTGAAGATCAATGGCAAGATAGTGGAGAGACCTCAACACATGTTGATGAGAGTGGCCGTT 813530
Query 248920 GGGATTCACAAGGATGACATAGAGAGCGTGCTCGAGACGTACA 248962
| |||||| | || || || || || || | ||||||||||
Sbjct 813529 GCTATTCACGAAGACGATATCGATAGGGTTATAGAGACGTACA 813487
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073676204964608
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |